Evidence map›Paper›PMID 36850487›Full record

ArticleSensors (Basel, Switzerland)2023

Leaf-Counting in Monocot Plants Using Deep Regression Models.

Xinyan Xie, Yufeng Ge, Harkamal Walia, Jinliang Yang, Hongfeng Yu

Open access · goldAbstract read
In one paragraph

Article in Sensors (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
4.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 12 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Xinyan XieSchool of Computing, University of Nebraska-Lincoln, Lincoln, NE 68588, USA.ORCID 0000-0003-0600-9623
Yufeng GeDepartment of Biological Systems Engineering, University of Nebraska-Lincoln, Lincoln, NE 68583, USA.ORCID 0000-0002-6460-0780
Harkamal WaliaDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE 68583, USA.ORCID 0000-0002-9712-5824
Jinliang YangDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE 68583, USA.ORCID 0000-0002-0999-3518
Hongfeng YuSchool of Computing, University of Nebraska-Lincoln, Lincoln, NE 68588, USA.ORCID 0000-0002-0596-8227
University of Nebraska–Lincoln · US

Funding

High Intensity Phenotyping Sites: Transitioning to a Nationwide Plant Phenotyping Network USDA-NIFA Award No. 2020-68013-32371National Science Foundation 1736192
6 · The paper itself

Abstract

Leaf numbers are vital in estimating the yield of crops. Traditional manual leaf-counting is tedious, costly, and an enormous job. Recent convolutional neural network-based approaches achieve promising results for rosette plants. However, there is a lack of effective solutions to tackle leaf counting for monocot plants, such as sorghum and maize. The existing approaches often require substantial training datasets and annotations, thus incurring significant overheads for labeling. Moreover, these approaches can easily fail when leaf structures are occluded in images. To address these issues, we present a new deep neural network-based method that does not require any effort to label leaf structures explicitly and achieves superior performance even with severe leaf occlusions in images. Our method extracts leaf skeletons to gain more topological information and applies augmentation to enhance structural variety in the original images. Then, we feed the combination of original images, derived skeletons, and augmentations into a regression model, transferred from Inception-Resnet-V2, for leaf-counting. We find that leaf tips are important in our regression model through an input modification method and a Grad-CAM method. The superiority of the proposed method is validated via comparison with the existing approaches conducted on a similar dataset. The results show that our method does not only improve the accuracy of leaf-counting, with overlaps and occlusions, but also lower the training cost, with fewer annotations compared to the previous state-of-the-art approaches.The robustness of the proposed method against the noise effect is also verified by removing the environmental noises during the image preprocessing and reducing the effect of the noises introduced by skeletonization, with satisfactory outcomes.

Indexed as

Crops, AgriculturalEdible GrainNeural Networks, ComputerPlant LeavesSkeletonconvolutional neural networkGrad-CAMleaf-countingplant phenotypingregression

Identifiers

PMID36850487
PMCPMC9962473
OpenAlexW4319600025

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.