Evidence map›Paper›PMID 36849657›Full record

ArticleNature genetics2023

Multiomic analysis of homologous recombination-deficient end-stage high-grade serous ovarian cancer.

Nikki L Burdett, Madelynne O Willis, Kathryn Alsop, Allison L Hunt, Ahwan Pandey, Phineas T Hamilton, Tamara Abulez, Xuan Liu, Therese Hoang, Stuart Craig and 27 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
12.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 83 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Integrative and deep learning-based prediction of therapy response in ovarian cancer.Journal of experimental & clinical cancer research : CR · 2025
    Article
  18. Article
  19. Article
  20. Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

37 authors at 11 institutions in 3 countries.

Nikki L BurdettPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
Madelynne O WillisPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.ORCID http://orcid.org/0000-0002-5387-6255
Kathryn AlsopPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
Allison L HuntWomen's Health Integrated Research Center, Inova Women's Service Line, Inova Health System, Annandale, Victoria, USA.ORCID http://orcid.org/0000-0002-2223-7944
Ahwan PandeyPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.ORCID http://orcid.org/0000-0003-2238-1054
Phineas T HamiltonDeeley Research Centre, BC Cancer, Victoria, British Columbia, Canada.
Tamara AbulezGynecologic Cancer Center of Excellence, Department of Obstetrics and Gynecology, Uniformed Services University and Walter Reed National Military Medical Center, Bethesda, MD, USA.ORCID http://orcid.org/0000-0001-5325-5064
Xuan LiuDepartment of Integrative Biology and Pharmacology, The University of Texas Health Science Center, Houston, TX, USA.
Therese HoangPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
Stuart CraigPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
Sian FeredayPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.ORCID http://orcid.org/0000-0002-8559-8579
Joy HendleyPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
Dale W GarsedPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.ORCID http://orcid.org/0000-0003-1223-0121
Katy MilneDeeley Research Centre, BC Cancer, Victoria, British Columbia, Canada.ORCID http://orcid.org/0000-0001-5616-1821
Shreena KalariaDeeley Research Centre, BC Cancer, Victoria, British Columbia, Canada.
Ashley MarshallDeeley Research Centre, BC Cancer, Victoria, British Columbia, Canada.
Brian L HoodGynecologic Cancer Center of Excellence, Department of Obstetrics and Gynecology, Uniformed Services University and Walter Reed National Military Medical Center, Bethesda, MD, USA.
Katlin N WilsonGynecologic Cancer Center of Excellence, Department of Obstetrics and Gynecology, Uniformed Services University and Walter Reed National Military Medical Center, Bethesda, MD, USA.
Kelly A ConradsGynecologic Cancer Center of Excellence, Department of Obstetrics and Gynecology, Uniformed Services University and Walter Reed National Military Medical Center, Bethesda, MD, USA.
Kathleen I PishasPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
Sumitra AnandaPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
Clare L ScottPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.ORCID http://orcid.org/0000-0002-3689-5956
Yoland AntillFaculty of Medicine, Nursing and Health Sciences, Monash University, Clayton, Victoria, Australia.
Orla McNallyThe Royal Women's Hospital, Parkville, Victoria, Australia.
Linda MileshkinPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.ORCID http://orcid.org/0000-0001-6826-6014
Anne HamiltonPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.ORCID http://orcid.org/0000-0003-0368-9838
George Au-YeungPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
Lisa DevereuxPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.ORCID http://orcid.org/0000-0003-2435-5888
Heather ThornePeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
Andrea BildDepartment of Medical Oncology and Therapeutics, City of Hope Comprehensive Cancer Center, Monrovia, CA, USA.ORCID http://orcid.org/0000-0002-4727-5533
Nicholas W BatemanGynecologic Cancer Center of Excellence, Department of Obstetrics and Gynecology, Uniformed Services University and Walter Reed National Military Medical Center, Bethesda, MD, USA.ORCID http://orcid.org/0000-0002-4425-9511
G Larry MaxwellWomen's Health Integrated Research Center, Inova Women's Service Line, Inova Health System, Annandale, Victoria, USA.
Jeffrey T ChangDepartment of Integrative Biology and Pharmacology, The University of Texas Health Science Center, Houston, TX, USA.ORCID http://orcid.org/0000-0002-4578-5636
Thomas P ConradsGynecologic Cancer Center of Excellence, Department of Obstetrics and Gynecology, Uniformed Services University and Walter Reed National Military Medical Center, Bethesda, MD, USA.ORCID http://orcid.org/0000-0003-4742-3281
Brad H NelsonDeeley Research Centre, BC Cancer, Victoria, British Columbia, Canada.ORCID http://orcid.org/0000-0002-4445-5539
David D L BowtellPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
Elizabeth L ChristiePeter MacCallum Cancer Centre, Melbourne, Victoria, Australia. liz.christie@petermac.org.ORCID http://orcid.org/0000-0002-9959-7024
The University of Melbourne · AUHenry M. Jackson Foundation · USPeter MacCallum Cancer Centre · AUInova Health System · USRoyal Women's Hospital · AUThe University of Texas Health Science Center at Houston · USCabrini Hospital · AUCity of Hope · USEpworth Hospital · AUUniversity of British Columbia · CAWalter and Eliza Hall Institute of Medical Research · AU

Funding

U.S. Department of Defense (United States Department of Defense) HU0001-16-2-0006U.S. Department of Defense (United States Department of Defense) HU0001-16-2-0014
6 · The paper itself

Abstract

High-grade serous ovarian cancer (HGSC) is frequently characterized by homologous recombination (HR) DNA repair deficiency and, while most such tumors are sensitive to initial treatment, acquired resistance is common. We undertook a multiomics approach to interrogate molecular diversity in end-stage disease, using multiple autopsy samples collected from 15 women with HR-deficient HGSC. Patients had polyclonal disease, and several resistance mechanisms were identified within most patients, including reversion mutations and HR restoration by other means. We also observed frequent whole-genome duplication and global changes in immune composition with evidence of immune escape. This analysis highlights diverse evolutionary changes within HGSC that evade therapy and ultimately overwhelm individual patients.

Indexed as

Cystadenocarcinoma, SerousOvarian NeoplasmsCarcinoma, Ovarian EpithelialFemaleHomologous RecombinationHumansMultiomics

Identifiers

PMID36849657
OpenAlexW4322492208

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.