Evidence map›Paper›PMID 36849488›Full record

ArticleScientific reports2023

Characterization and functional analyses of wheat TaPR1 genes in response to stripe rust fungal infection.

Rong Liu, Jing Lu, Jiayi Xing, Lv Xue, Yu Wu, Lei Zhang

Abstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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  11. Transcriptome-WidePlants (Basel, Switzerland) · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Rong Liu *Faculty of Agriculture, Forestry and Food Engineering of Yibin University, Yibin, 644000, China. liurong@yibinu.edu.cn.
Jing Lu *Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Jiayi XingChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Lv XueChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Yu WuChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China.
Lei ZhangChengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China. zhanglei@cib.ac.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The pathogenesis-related protein-1 (PR1) gene is important for plants to respond to various biotic and abiotic stresses. Unlike those in model plants, PR1 genes in wheat have not been systematically studied. Herein, we identified 86 potential TaPR1 wheat genes using bioinformatics tools and RNA sequencing. Kyoto Encyclopedia of Genes and Genomes analysis indicated that the TaPR1 genes were involved in the salicylic acid signalling pathway, MAPK signalling pathway, and phenylalanine metabolism in response to Pst-CYR34 infection. Ten of the TaPR1 genes were structurally characterized and validated by RT‒PCR. One particular gene, TaPR1-7, was found to be associated with resistance to Puccinia striiformis f. sp. tritici (Pst) in a biparental wheat population. Virus-induced gene silencing showed that TaPR1-7 is important for Pst resistance in wheat. This study provides the first comprehensive study on wheat PR1 genes, improving our overall understanding of these genes in plant defenses, particularly against stripe rust.

Indexed as

BasidiomycotaConnective Tissue DiseasesEczemaMycosesSkin Diseases, BacterialComputational BiologySignal TransductionTriticum

Identifiers

PMID36849488
PMCPMC9971213

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.