Evidence map›Paper›PMID 36847415›Full record

ArticleExperimental biology and medicine (Maywood, N.J.)2023

Identification and validation of hub genes in CD5-positive diffuse large B-cell lymphoma.

Ming Yang, Xingjian Niu, Xudong Yang, Yutian Sun, Wenjia Su, Jing Zhang, Qianjiang Wu, Yiran Wang, Qingyuan Zhang, Hongfei Ji

Open access · greenAbstract read
In one paragraph

Article in Experimental biology and medicine (Maywood, N.J.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Ming YangDepartment of Medical Oncology, Harbin Medical University Cancer Hospital, Harbin Medical University, Harbin 150081, Heilongjiang, China.
Xingjian NiuDepartment of Medical Oncology, Harbin Medical University Cancer Hospital, Harbin Medical University, Harbin 150081, Heilongjiang, China.
Xudong YangInstitute of Cancer Prevention and Treatment, Harbin Medical University, Harbin 150081, Heilongjiang, China.
Yutian SunDepartment of Medical Oncology, Harbin Medical University Cancer Hospital, Harbin Medical University, Harbin 150081, Heilongjiang, China.
Wenjia SuDepartment of Hematology, First Affiliated Hospital of Harbin Medical University, Harbin Medical University, Harbin 150081, Heilongjiang, China.
Jing ZhangInstitute of Cancer Prevention and Treatment, Harbin Medical University, Harbin 150081, Heilongjiang, China.
Qianjiang WuInstitute of Cancer Prevention and Treatment, Harbin Medical University, Harbin 150081, Heilongjiang, China.
Yiran WangInstitute of Cancer Prevention and Treatment, Harbin Medical University, Harbin 150081, Heilongjiang, China.
Qingyuan ZhangDepartment of Medical Oncology, Harbin Medical University Cancer Hospital, Harbin Medical University, Harbin 150081, Heilongjiang, China.
Hongfei JiInstitute of Cancer Prevention and Treatment, Harbin Medical University, Harbin 150081, Heilongjiang, China.ORCID 0000-0003-0649-2432
Harbin Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

CD5+ diffuse large B-cell lymphoma (DLBCL), as a significant heterogeneity category of DLBCL, is reflected in both the molecular biological and genetic levels, which in turn induces ever-changing clinical manifestations, and what mediates tumor survival mechanisms are still unclear. This study aimed to predict the potential hub genes in CD5+ DLBCL. A total of 622 patients with DLBCL diagnosed between 2005 and 2019 were included. High expression of CD5 was correlated with IPI, LDH, and Ann Arbor stage, patients with CD5-DLBCL have longer overall survival. We identified 976 DEGs between CD5-negative and positive DLBCL patients in the GEO database and performed GO and KEGG enrichment analysis. After intersecting the genes obtained through the Cytohubba and MCODE, further external verification was performed in the TCGA database. Three hub genes were screened: VSTM2B, GRIA3, and CCND2, of which CCND2 were mainly involved in cell cycle regulation and JAK-STAT signaling pathways. Analysis of clinical samples showed that the expression of CCND2 was found to be correlated with CD5 (

Indexed as

Lymphoma, Large B-Cell, DiffuseCyclin D2HumansMembrane ProteinsPrognosisReceptors, AMPACCND2 protein, humanCyclin D2glutamate receptor ionotropic, AMPA 3Membrane ProteinsReceptors, AMPACCND2CD5diffuse large B-cell lymphomahub genesprognosis

Identifiers

PMID36847415
PMCPMC10666729
OpenAlexW4322494735

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.