Evidence map›Paper›PMID 36845531›Full record

ArticleBio-protocol2023

Imaging Membrane Proteins Using Total Internal Reflection Fluorescence Microscopy (TIRFM) in Mammalian Cells.

Kirin D Gada, Jordie M Kamuene, Takeharu Kawano, Leigh D Plant

Open access · diamondAbstract read
In one paragraph

Article in Bio-protocol, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.4field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. PIPbioRxiv : the preprint server for biology · 2026
    Article
  2. Allosteric coupling between PIPProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Exploring Biophysics at the Membrane with Single-Molecule TIRF Microscopy.Advances in experimental medicine and biology · 2026
    Review
  4. PI(4,5)P2 regulates the gating of NaV1.4 channels.The Journal of general physiology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Kirin D GadaDepartment of Pharmaceutical Sciences, Bouve College of Health Sciences, Northeastern University, Boston, USA.
Jordie M KamueneDepartment of Pharmaceutical Sciences, Bouve College of Health Sciences, Northeastern University, Boston, USA.
Takeharu KawanoDepartment of Pharmaceutical Sciences, Bouve College of Health Sciences, Northeastern University, Boston, USA.
Leigh D PlantDepartment of Pharmaceutical Sciences, Bouve College of Health Sciences, Northeastern University, Boston, USA.
University of Bahrain · BHNortheastern University · US

Funding

SUMO-regulation of ion channels via PIP2R01HL144615 · NHLBI · NORTHEASTERN UNIVERSITY · PI PLANT, LEIGH DANIEL · 2019 to 2022
$1.6M
NHLBI NIH HHS R01 HL144615
6 · The paper itself

Abstract

The cell surfaceome is of vital importance across physiology, developmental biology, and disease states alike. The precise identification of proteins and their regulatory mechanisms at the cell membrane has been challenging and is typically determined using confocal microscopy, two-photon microscopy, or total internal reflection fluorescence microscopy (TIRFM). Of these, TIRFM is the most precise, as it harnesses the generation of a spatially delimited evanescent wave at the interface of two surfaces with distinct refractive indices. The limited penetration of the evanescent wave illuminates a narrow specimen field, which facilitates the localization of fluorescently tagged proteins at the cell membrane but not inside of the cell. In addition to constraining the depth of the image, TIRFM also significantly enhances the signal-to-noise ratio, which is particularly valuable in the study of live cells. Here, we detail a protocol for micromirror TIRFM analysis of optogenetically activated protein kinase C-ε in HEK293-T cells, as well as data analysis to demonstrate the translocation of this construct to the cell-surface following optogenetic activation. Graphic abstract.

Indexed as

FluorescenceMembrane proteinsOptogeneticsTIRFMTotal internal reflection fluorescence microscopy

Identifiers

PMID36845531
PMCPMC9947549
OpenAlexW4320923526

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.