Evidence map›Paper›PMID 36832138›Full record

ArticleDiagnostics (Basel, Switzerland)2023

Investigating the Impact of Two Major Programming Environments on the Accuracy of Deep Learning-Based Glioma Detection from MRI Images.

Vadi Su Yilmaz, Metehan Akdag, Yaser Dalveren, Resat Ozgur Doruk, Ali Kara, Ahmet Soylu

Open access · goldAbstract read
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Vadi Su YilmazDepartment of Electrical and Electronics Engineering, Atilim University, Kizilcasar Mahallesi, Incek Golbasi, Ankara 06830, Turkey.
Metehan AkdagFonet Information Technologies, Kizilirmak Mahallesi, Cukurambar Cankaya, Ankara 06520, Turkey.
Yaser DalverenDepartment of Electrical and Electronics Engineering, Atilim University, Kizilcasar Mahallesi, Incek Golbasi, Ankara 06830, Turkey.ORCID 0000-0002-9459-0042
Resat Ozgur DorukDepartment of Electrical and Electronics Engineering, Atilim University, Kizilcasar Mahallesi, Incek Golbasi, Ankara 06830, Turkey.
Ali KaraDepartment of Electrical and Electronics Engineering, Gazi University, Eti Mahallesi, Yukselis Sokak, Maltepe, Ankara 06570, Turkey.ORCID 0000-0002-9739-7619
Ahmet SoyluDepartment of Computer Science, OsloMet-Oslo Metropolitan University, Pilestredet 35, Oslo 0167, Norway.
Atilim University · TRGazi University · TROsloMet – Oslo Metropolitan University · NO

Funding

Atilim University ATU-LAP-2021-05
6 · The paper itself

Abstract

Brain tumors have been the subject of research for many years. Brain tumors are typically classified into two main groups: benign and malignant tumors. The most common tumor type among malignant brain tumors is known as glioma. In the diagnosis of glioma, different imaging technologies could be used. Among these techniques, MRI is the most preferred imaging technology due to its high-resolution image data. However, the detection of gliomas from a huge set of MRI data could be challenging for the practitioners. In order to solve this concern, many Deep Learning (DL) models based on Convolutional Neural Networks (CNNs) have been proposed to be used in detecting glioma. However, understanding which CNN architecture would work efficiently under various conditions including development environment or programming aspects as well as performance analysis has not been studied so far. In this research work, therefore, the purpose is to investigate the impact of two major programming environments (namely, MATLAB and Python) on the accuracy of CNN-based glioma detection from Magnetic Resonance Imaging (MRI) images. To this end, experiments on the Brain Tumor Segmentation (BraTS) dataset (2016 and 2017) consisting of multiparametric magnetic MRI images are performed by implementing two popular CNN architectures, the three-dimensional (3D) U-Net and the V-Net in the programming environments. From the results, it is concluded that the use of Python with Google Colaboratory (Colab) might be highly useful in the implementation of CNN-based models for glioma detection. Moreover, the 3D U-Net model is found to perform better, attaining a high accuracy on the dataset. The authors believe that the results achieved from this study would provide useful information to the research community in their appropriate implementation of DL approaches for brain tumor detection.

Indexed as

brain tumor detectiondeep learninggliomaMATLABperformance assessmentPythonU-NetV-Net

Identifiers

PMID36832138
PMCPMC9955350
OpenAlexW4319965831

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.