Evidence map›Paper›PMID 36832022›Full record

ArticleBiosensors2023

Distinguishing Healthy and Carcinoma Cell Cultures Using Fluorescence Spectra Decomposition with a Genetic-Algorithm-Based Code.

Marie Pospíšilová, Hana Kalábová, Gabriela Kuncová

Open access · goldAbstract read
In one paragraph

Article in Biosensors, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.7field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Marie PospíšilováFaculty of Biomedical Engineering, Czech Technical University, nam. Sitna 3105, 272 01 Kladno, Czech Republic.ORCID 0000-0001-9093-2466
Hana KalábováFaculty of Biomedical Engineering, Czech Technical University, nam. Sitna 3105, 272 01 Kladno, Czech Republic.ORCID 0000-0003-3475-2799
Gabriela KuncováInstitute of Chemical Process Fundamentals of the ASCR, Rozvojova 135, 165 00 Prague, Czech Republic.
Czech Technical University in Prague · CZJan Evangelista Purkyně University in Ústí nad Labem · CZ

Funding

Czech Technical University in Prague SGS19/135/OHK4/2T/17, SGS21/083/OHK4/1T/17
6 · The paper itself

Abstract

In this paper, we analysed the steady state fluorescence spectra of cell suspensions containing healthy and carcinoma fibroblast mouse cells, using a genetic-algorithm-spectra-decomposition software (GASpeD). In contrast to other deconvolution algorithms, such as polynomial or linear unmixing software, GASpeD takes into account light scatter. In cell suspensions, light scatter plays an important role as it depends on the number of cells, their size, shape, and coagulation. The measured fluorescence spectra were normalized, smoothed and deconvoluted into four peaks and background. The wavelengths of intensities' maxima of lipopigments (LR), FAD, and free/bound NAD(P)H (AF/AB) of the deconvoluted spectra matched published data. In deconvoluted spectra at pH = 7, the fluorescence intensities of the AF/AB ratio in healthy cells was always higher in comparison to carcinoma cells. In addition, the AF/AB ratio in healthy and carcinoma cells were influenced differently by changes in pH. In mixtures of healthy and carcinoma cells, AF/AB decreases when more than 13% of carcinoma cells are present. Expensive instrumentation is not required, and the software is user friendly. Due to these attributes, we hope that this study will be a first step in the development of new cancer biosensors and treatments with the use of optical fibers.

Indexed as

AlgorithmsCarcinomaAnimalsCell Culture TechniquesFluorescenceMiceSoftwareSpectrometry, Fluorescencecancer biosensorcell suspension auto-fluorescenceendogenous fluorophoresgenetic algorithmsteady state fluorescence

Identifiers

PMID36832022
PMCPMC9954475
OpenAlexW4320492845

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.