Evidence map›Paper›PMID 36829178›Full record

ArticleBMC medicine2023

Rare mutation-dominant compound EGFR-positive NSCLC is associated with enriched kinase domain-resided variants of uncertain significance and poor clinical outcomes.

Weixin Zhao, Ailing Song, Yang Xu, Qian Wu, Cuicui Liu, Jiani C Yin, Qiuxiang Ou, Xue Wu, Yang Shao, Xinmin Zhao

Abstract read
In one paragraph

Article in BMC medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Weixin Zhao *Department of Radiation Oncology, Fudan University Shanghai Cancer Center, Shanghai, 200032, China.
Ailing Song *Department of Respiratory Medicine, Wuxi Branch of Ruijin Hospital, Shanghai Jiao Tong University, Wuxi, Jiangsu, 214145, China.
Yang XuGeneseeq Research Institute, Nanjing Geneseeq Technology Inc, Nanjing, 210032, Jiangsu, China.
Qian WuGeneseeq Research Institute, Nanjing Geneseeq Technology Inc, Nanjing, 210032, Jiangsu, China.
Cuicui LiuGeneseeq Research Institute, Nanjing Geneseeq Technology Inc, Nanjing, 210032, Jiangsu, China.
Jiani C YinGeneseeq Research Institute, Nanjing Geneseeq Technology Inc, Nanjing, 210032, Jiangsu, China.
Qiuxiang OuGeneseeq Research Institute, Nanjing Geneseeq Technology Inc, Nanjing, 210032, Jiangsu, China.
Xue WuGeneseeq Research Institute, Nanjing Geneseeq Technology Inc, Nanjing, 210032, Jiangsu, China.
Yang ShaoGeneseeq Research Institute, Nanjing Geneseeq Technology Inc, Nanjing, 210032, Jiangsu, China.
Xinmin ZhaoDepartment of Oncology, Shanghai Medical College, Fudan University, Shanghai, 200032, China. mizuyiaaa@163.com.

Funding

National Natural Science 81302009
6 · The paper itself

Abstract

backgroundCompound epidermal growth factor receptor (EGFR) mutations are less responsive to tyrosine kinase inhibitors (TKIs) than single EGFR mutations in non-small cell lung cancer (NSCLC). However, the detailed clinical characteristics and prognosis of various compound EGFR mutations remain to be elucidated.

methodsWe retrospectively studied the next-generation sequencing (NGS) data of treatment-naïve tumors from 1025 NSCLC patients with compound EGFR mutations, which were sub-categorized into different combinations of common mutations (19-Del and EGFR exon 21 p.L858R), rare mutations, and variants of uncertain significance (VUSs). Prognosis and drug resistance to first-line TKIs were analyzed in 174 and 95 patients, respectively.

resultsCompound EGFR mutations were enriched with EGFR exon 21 p.L858R and rare mutations, but not 19-Del (P < 0.001). The common + rare and rare + rare subtypes had fewer concurrent mutations in the PI3K pathway (P = 0.032), while the rare + rare and common + VUSs subtypes showed increased association with smoking- and temozolomide-related mutational signatures, respectively (P < 0.001). The rare mutation-dominant subtypes (rare + VUSs and rare + rare) had the worst clinical outcomes to first-line TKIs (P < 0.001), which was further confirmed using an external cohort (P = 0.0066). VUSs in the rare + VUSs subtype selectively reside in the EGFR kinase domain (P < 0.001), implying these tumors might select additional mutations to disrupt the regulation/function of the kinase domain.

conclusionsDifferent subtypes of compound EGFR mutations displayed distinct clinical features and genetic architectures, and rare mutation-dominant compound EGFR mutations were associated with enriched kinase domain-resided VUSs and poor clinical outcomes. Our findings help better understand the oncogenesis of compound EGFR mutations and forecast prognostic outcomes of personalized treatments.

Indexed as

Carcinoma, Non-Small-Cell LungLung NeoplasmsErbB ReceptorsHumansMutationPhosphatidylinositol 3-KinasesProtein Kinase InhibitorsRetrospective StudiesTreatment OutcomeEGFR protein, humanErbB ReceptorsPhosphatidylinositol 3-KinasesProtein Kinase InhibitorsCompound EGFR mutationsNon-small cell lung cancerPrecision medicineResistant mechanismTyrosine kinase inhibitors

Identifiers

PMID36829178
PMCPMC9960474

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.