Evidence map›Paper›PMID 36824313›Full record

ArticleInfluenza and other respiratory viruses2023

Results from the second WHO external quality assessment for the molecular detection of respiratory syncytial virus, 2019-2020.

Thomas Williams, Sandra Jackson, Ian Barr, Shabana Bi, Jinal Bhiman, Joanna Ellis, Anne von Gottberg, Stephen Lindstrom, Teresa Peret, Sanjiv Rughooputh and 65 more

Open access · goldAbstract read
In one paragraph

Article in Influenza and other respiratory viruses, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

75 authors at 8 institutions in 6 countries.

Thomas WilliamsUniversity of Edinburgh Edinburgh UK.
Sandra JacksonWorld Health Organization Geneva Switzerland.ORCID 0000-0002-1042-8882
Ian BarrPeter Doherty Institute for Infection and Immunity WHO Collaborating Centre for Reference and Research on Influenza, Victorian Infectious Disease Reference Laboratory (VIDRL) Melbourne Victoria Australia.ORCID 0000-0002-7351-418X
Shabana BiUnited Kingdom Health Security Agency (UKHSA) London UK.
Jinal BhimanCentre for Respiratory Diseases and Meningitis National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service Johannesburg South Africa.
Joanna EllisUnited Kingdom Health Security Agency (UKHSA) London UK.
Anne von GottbergCentre for Respiratory Diseases and Meningitis National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service Johannesburg South Africa.
Stephen LindstromRespiratory Virus Branch, Division of Viral Diseases Centers for Disease Control and Prevention Atlanta Georgia USA.
Teresa PeretDivision of Infectious Diseases, Department of Internal Medicine University of Texas Medical Branch Galveston Texas USA.
Sanjiv RughooputhUnited Kingdom Health Security Agency (UKHSA) London UK.
Mariana ViegasVirology Laboratory Ricardo Gutiérrez Children's Hospital Buenos Aires Argentina.ORCID 0000-0002-6506-1635
Siddhivinayak HirveWorld Health Organization Geneva Switzerland.ORCID 0000-0002-9651-7789
Maria ZambonUnited Kingdom Health Security Agency (UKHSA) London UK.
Wenqing ZhangWorld Health Organization Geneva Switzerland.
WHO RSV Surveillance Group
Ndongo DiaVirology Department National Influenza Centre, Pasteur Institute of Dakar Dakar Senegal.
Norosoa RazanazatovoNational Influenza Laboratory Institut Pasteur de Madagascar Antananarivo Madagascar.
Ajaeb Dakhilalla M H Al-NabetQatar-HAMAD-NIC, Department of Laboratory Medicine and Pathology Hamad Medical Corporation Doha Qatar.
Abdinasir AbubakarCentral Public Health Laboratory Ministry of Health Cairo Egypt.
Almiro TivaneViral Isolation Laboratory, Department of Technological Platforms National Institute of Health/MISAU Marracuene Mozambique.
Amal BarakatEastern Mediterranean Regional Office World Health Organization Cairo Egypt.
Amel NaguibCentral Public Health Laboratory Ministry of Health Cairo Egypt.
Ammar AzizPeter Doherty Institute for Infection and Immunity WHO Collaborating Centre for Reference and Research on Influenza, Victorian Infectious Disease Reference Laboratory (VIDRL) Melbourne Victoria Australia.
Andrea VicariPan American Health Organization Washington District of Columbia USA.
Ann MoenWorld Health Organization Geneva Switzerland.
Arunkumar GovindakarnavarWHO Country Office Kathmandu Nepal.
Aron HallDivision of Viral Diseases, Respiratory Viruses Branch Centers for Disease Control and Prevention (CDC) Atlanta Georgia USA.
Badarch DarmaaVirology Laboratory National Center for Communicable Diseases Ulaanbaatar Mongolia.
Bastien NathalieInfluenza and Respiratory Viruses Section, National Microbiology Laboratory Public Health Agency of Canada Winnipeg Manitoba Canada.
Belinda HerringAfrican Region Office World Health Organization Brazzaville Congo.
Braulia C CaetanoOswaldo Cruz Foundation Respiratory Virus Laboratory FIOCRUZ Rio de Janeiro Brazil.
Brett WhittakerRespiratory Diseases Branch (RDB), Division of Bacterial Diseases (DBD) Centers for Disease Control and Prevention (CDC) Atlanta Georgia USA.
Elsa BaumeisterRespiratory Virosis Service, Virology Department INEI-ANLIS Dr. Carlos G Malbrán Buenos Aires Argentina.
Emmanuel NakounéEpidemiological Surveillance Pasteur Institute of Bangui Bangui Central African Republic.
Erica GuthrieInternational Reagent Resources (IRR), Centers for Disease Control and Prevention (CDC) Atlanta Georgia USA.
Francis InbanathanSouth-East Asia Region Office World Health Organization New Delhi India.
Harish NairMedical School The University of Edinburgh Edinburgh UK.
Harry CampbellUsher Institute of Population Health Research and Informatics University of Edinburgh Edinburgh UK.
Herve A KadjoDepartment of Epidemic Viruses Pasteur Institute of Ivory Coast Abidjan Côte d'Ivoire.
Hicham OumzilVirology Department, Manager of National Influenza Center National Institute of Hygiene, Ministry of Health Rabat Morocco.
Jean-Michel HeraudNational Influenza Laboratory Institut Pasteur de Madagascar Antananarivo Madagascar.
Joshua A MottUS CDC Thailand sub-regional office Nonthaburi Thailand.
Joyce NamulondoUganda Virus Research Institute Entebbe Uganda.
Juliana LeiteDivision of Viral Diseases, Respiratory Viruses Branch Centers for Disease Control and Prevention (CDC) Atlanta Georgia USA.
Karen NahapetyanWestern Pacific Region Office World Health Organization Manila Philippines.
Lubna Al AriqiEastern Mediterranean Region Office World Health Organization Cairo Egypt.
Mahmoud Hamad Ibraheem GazoCentral Public Health Laboratory Ministry of Health Cairo Egypt.
Mandeep ChadhaNational Institute of Virology Indian Council of Medical Research Pune India.
Maria PisarevaLaboratory of Molecular Virology Smorodintsev Research Institute of Influenza St. Petersburg Russian Federation.
Marietjie VenterCenter for Viral Zoonosis, Department of Medical Virology University of Pretoria Pretoria South Africa.
Marilda M SiqueiraLaboratorio de Virus Respiratorios, IOC/FIOCRUZ Rio de Janeiro Brazil.
Mayan LumandasDepartment of Health Research Institute for Tropical Medicine Muntinlupa Philippines.
Mbayame NiangVirology Department National Influenza Centre, Pasteur Institute of Dakar Dakar Senegal.
Mona AlbuainiNational Influenza Centre, Research Laboratory Rafic Hariri University Hospital Beirut Lebanon.
Muhammad SalmanCentral of Public Health Laboratory National Institute of Health Islamabad Pakistan.
Steve ObersteDivision of Viral Diseases, Respiratory Viruses Branch Centers for Disease Control and Prevention (CDC) Atlanta Georgia USA.
Padmini SrikantiahBill and Melinda Gates Foundation Seattle Washington USA.
Patrick TangSidra Medicine Doha Qatar.
Paula CoutoDivision of Viral Diseases, Respiratory Viruses Branch Centers for Disease Control and Prevention (CDC) Atlanta Georgia USA.
Peter SmithMRC International Statistics and Epidemiology Group London School of Hygiene and Tropical Medicine London UK.
Peter Valentine CoyleQatar-HAMAD-NIC, Department of Laboratory Medicine and Pathology Hamad Medical Corporation Doha Qatar.
Philippe DussartNational Influenza Laboratory Institut Pasteur de Madagascar Antananarivo Madagascar.
Phuong Nam NguyenWestern Pacific Region Office World Health Organization Manila Philippines.
Pilailuk Akkapaiboon OkadaDepartment of Medical Sciences Respiratory virus section, Thai NIC, National Institute of Health Nonthaburi Thailand.
Pushpa Ranjan WijesingheSouth-East Asia Region Office World Health Organization New Delhi India.
Reuben SamuelSouth-East Asia Region Office World Health Organization New Delhi India.
Richard BrownSouth-East Asia Region Office World Health Organization New Delhi India.
Richard PebodyRegional Office for Europe World Health Organization Copenhagen Denmark.
Rodrigo FasceSub-department of Viral Diseases Institute of Public Health of Chile Santiago Chile.
Runa JhaNational Public Health Laboratory, Department of Health Services Ministry of Health and Population Kathmandu Nepal.
Stephen LindstromDivision of Viral Diseases, Respiratory Viruses Branch Centers for Disease Control and Prevention (CDC) Atlanta Georgia USA.
Sue GerberDivision of Viral Diseases, Respiratory Viruses Branch Centers for Disease Control and Prevention (CDC) Atlanta Georgia USA.
Varsha PotdarNational Institute of Virology Indian Council of Medical Research Pune India.
Xiaomin DongPeter Doherty Institute for Infection and Immunity WHO Collaborating Centre for Reference and Research on Influenza, Victorian Infectious Disease Reference Laboratory (VIDRL) Melbourne Victoria Australia.
Yi Mo DengPeter Doherty Institute for Infection and Immunity WHO Collaborating Centre for Reference and Research on Influenza, Victorian Infectious Disease Reference Laboratory (VIDRL) Melbourne Victoria Australia.
National Security Agency · USWorld Health Organization · CHNational Health Laboratory Service · ZACenters for Disease Control and Prevention · USConsejo Nacional de Investigaciones Científicas y Técnicas · ARThe University of Melbourne · AUThe University of Texas Medical Branch at Galveston · USUniversity of Edinburgh · GB

Funding

Medical Research Council MR/R010161/1World Health Organization 001
6 · The paper itself

Abstract

Background: External quality assessments (EQAs) for the molecular detection of human respiratory syncytial virus (RSV) are necessary to ensure the standardisation of reliable results. The Phase II, 2019-2020 World Health Organization (WHO) RSV EQA included 28 laboratories in 26 countries. The EQA panel evaluated performance in the molecular detection and subtyping of RSV-A and RSV-B. This manuscript describes the preparation, distribution, and analysis of the 2019-2020 WHO RSV EQA. Methods: Panel isolates underwent whole genome sequencing and in silico primer matching. The final panel included nine contemporary, one historical virus and two negative controls. The EQA panel was manufactured and distributed by the UK National External Quality Assessment Service (UK NEQAS). National laboratories used WHO reference assays developed by the United States Centers for Disease Control and Prevention, an RSV subtyping assay developed by the Victorian Infectious Diseases Reference Laboratory (Australia), or other in-house or commercial assays already in use at their laboratories. Results: An in silico analysis of isolates showed a good match to assay primer/probes. The panel was distributed to 28 laboratories. Isolates were correctly identified in 98% of samples for detection and 99.6% for subtyping. Conclusions: The WHO RSV EQA 2019-2020 showed that laboratories performed at high standards. Updating the composition of RSV molecular EQAs with contemporary strains to ensure representation of circulating strains, and ensuring primer matching with EQA panel viruses, is advantageous in assessing diagnostic competencies of laboratories. Ongoing EQAs are recommended because of continued evolution of mismatches between current circulating strains and existing primer sets.

Indexed as

Respiratory Syncytial Virus, HumanVirusesAustraliaHumansLaboratoriesUnited StatesWorld Health Organizationlaboratory diagnostics and systemsrespiratory diseasesstrengthening laboratory capacity for infectious disease control

Identifiers

PMID36824313
PMCPMC9849090
OpenAlexW4317369581

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.