Evidence map›Paper›PMID 36823663›Full record

ArticleIMA fungus2023

Phylogeography and population structure of the global, wide host-range hybrid pathogen Phytophthora × cambivora.

Martin S Mullett, Kris Van Poucke, Annelies Haegeman, Fran Focquet, Nicholas C Cauldron, Brian J Knaus, Marilia Horta Jung, Koji Kageyama, Ayaka Hieno, Hayato Masuja and 7 more

Open access · goldAbstract read
In one paragraph

Article in IMA fungus, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
4.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
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  4. Journal of fungi (Basel, Switzerland) · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 8 institutions in 5 countries.

Martin S MullettPhytophthora Research Centre, Department of Forest Protection and Wildlife Management, Mendel University in Brno, Brno, Czech Republic. martin.mullett@mendelu.cz.ORCID http://orcid.org/0000-0002-6013-0347
Kris Van PouckeFlanders Research Institute for Agriculture, Fisheries and Food (ILVO), Plant Sciences Unit, Merelbeke, Belgium.
Annelies HaegemanFlanders Research Institute for Agriculture, Fisheries and Food (ILVO), Plant Sciences Unit, Merelbeke, Belgium.
Fran FocquetFlanders Research Institute for Agriculture, Fisheries and Food (ILVO), Plant Sciences Unit, Merelbeke, Belgium.
Nicholas C CauldronDepartment of Botany and Plant Pathology, Oregon State University, Corvallis, OR, USA.
Brian J KnausDepartment of Horticulture, Oregon State University, Corvallis, OR, USA.
Marilia Horta JungPhytophthora Research Centre, Department of Forest Protection and Wildlife Management, Mendel University in Brno, Brno, Czech Republic.
Koji KageyamaRiver Basin Research Center, Gifu University, Gifu, Japan.
Ayaka HienoRiver Basin Research Center, Gifu University, Gifu, Japan.
Hayato MasujaForestry and Forest Products Research Institute (FFPRI), Tsukuba, Ibaraki, Japan.
Seiji UematsuDepartment of Bioregulation and Biointeraction, Laboratory of Molecular and Cellular Biology, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, Japan.
Joan F WebberForest Research, Alice Holt Lodge, Farnham, Surrey, UK.
Clive M BrasierForest Research, Alice Holt Lodge, Farnham, Surrey, UK.
József BakonyiPlant Protection Institute, Centre for Agricultural Research, ELKH, Budapest, Hungary.
Kurt HeungensFlanders Research Institute for Agriculture, Fisheries and Food (ILVO), Plant Sciences Unit, Merelbeke, Belgium.
Niklaus J GrünwaldHorticultural Crops Research Unit, United States Department of Agriculture, Agricultural Research Service, Corvallis, OR, USA.
Thomas JungPhytophthora Research Centre, Department of Forest Protection and Wildlife Management, Mendel University in Brno, Brno, Czech Republic.
Mendel University in Brno · CZForest Research · GBGifu University · JPOregon State University · USAgricultural Research Service · USCentre for Agricultural Research · HUForestry and Forest Products Research Institute · JPTokyo University of Agriculture and Technology · JP

Funding

European Regional Development Fund CZ.02.1.01/0.0/0.0/15_003/0000453Portuguese Science and Technology Foundation (FCT) BIODIVERSA/0002/2012
6 · The paper itself

Abstract

Invasive, exotic plant pathogens pose a major threat to native and agricultural ecosystems. Phytophthora × cambivora is an invasive, destructive pathogen of forest and fruit trees causing severe damage worldwide to chestnuts (Castanea), apricots, peaches, plums, almonds and cherries (Prunus), apples (Malus), oaks (Quercus), and beech (Fagus). It was one of the first damaging invasive Phytophthora species to be introduced to Europe and North America, although its origin is unknown. We determined its population genetic history in Europe, North and South America, Australia and East Asia (mainly Japan) using genotyping-by-sequencing. Populations in Europe and Australia appear clonal, those in North America are highly clonal yet show some degree of sexual reproduction, and those in East Asia are partially sexual. Two clonal lineages, each of opposite mating type, and a hybrid lineage derived from these two lineages, dominated the populations in Europe and were predominantly found on fagaceous forest hosts (Castanea, Quercus, Fagus). Isolates from fruit trees (Prunus and Malus) belonged to a separate lineage found in Australia, North America, Europe and East Asia, indicating the disease on fruit trees could be caused by a distinct lineage of P. × cambivora, which may potentially be a separate sister species and has likely been moved with live plants. The highest genetic diversity was found in Japan, suggesting that East Asia is the centre of origin of the pathogen. Further surveys in unsampled, temperate regions of East Asia are needed to more precisely identify the location and range of the centre of diversity.

Indexed as

HybridizationInvasive pathogenPolyploidyPopulation genetics

Identifiers

PMID36823663
PMCPMC9951538
OpenAlexW4321614626

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.