Evidence map›Paper›PMID 36823631›Full record

ArticleMicrobial cell factories2023

Mapping competitive pathways to terpenoid biosynthesis in Synechocystis sp. PCC 6803 using an antisense RNA synthetic tool.

João S Rodrigues, Barbara Bourgade, Karen R Galle, Pia Lindberg

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
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  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 2 countries.

João S RodriguesDepartment of Chemistry - Ångström, Uppsala University, Uppsala, Sweden.
Barbara BourgadeDepartment of Chemistry - Ångström, Uppsala University, Uppsala, Sweden.
Karen R GalleDepartment of Chemistry - Ångström, Uppsala University, Uppsala, Sweden.
Pia LindbergDepartment of Chemistry - Ångström, Uppsala University, Uppsala, Sweden. pia.lindberg@kemi.uu.se.
Uppsala University · SE

Funding

Carl Tryggers Stiftelse för Vetenskaplig Forskning 20:412Energimyndigheten,Sweden 38334-3NordForsk 82845Svenska Forskningsrådet Formas 2021-01669
6 · The paper itself

Abstract

backgroundSynechocystis sp. PCC 6803 utilizes pyruvate and glyceraldehyde 3-phosphate via the methylerythritol 4-phosphate (MEP) pathway for the biosynthesis of terpenoids. Considering the deep connection of the MEP pathway to the central carbon metabolism, and the low carbon partitioning towards terpenoid biosynthesis, significant changes in the metabolic network are required to increase cyanobacterial production of terpenoids.

resultsWe used the Hfq-MicC antisense RNA regulatory tool, under control of the nickel-inducible P

conclusionsWe demonstrated that the Hfq-MicC synthetic tool can be used to evaluate the effects of gene knockdown on heterologous terpenoid production, despite the need for further optimization of the technique. Possible targets for future engineering of Synechocystis aiming at improved terpenoid microbial production were identified.

Indexed as

SynechocystisAmino AcidsButadienesCarbonChlorophyll AErythritolHemiterpenesMetabolic EngineeringSugar PhosphatesTerpenes2-C-methylerythritol 4-phosphateAmino AcidsButadienesCarbonChlorophyll AErythritolHemiterpenesisopreneSugar PhosphatesTerpenesAntisense RNABisaboleneIsopreneMetabolic engineeringSynechocystis sp. PCC 6803Terpenoids

Identifiers

PMID36823631
PMCPMC9951418
OpenAlexW4321638906

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.