Evidence map›Paper›PMID 36823453›Full record

ArticleISME communications2023

Importance of mobile genetic element immunity in numerically abundant Trichodesmium clades.

Eric A Webb, Noelle A Held, Yiming Zhao, Elaina D Graham, Asa E Conover, Jake Semones, Michael D Lee, Yuanyuan Feng, Fei-Xue Fu, Mak A Saito and 1 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in ISME communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Eric A WebbMarine and Environmental Biology, Department of Biological Sciences, University of Southern California, Los Angeles, CA, 90089, USA. eawebb@usc.edu.ORCID http://orcid.org/0000-0003-4085-7730
Noelle A HeldDepartment of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, MA, 02543, USA.ORCID http://orcid.org/0000-0003-1073-0851
Yiming ZhaoMarine and Environmental Biology, Department of Biological Sciences, University of Southern California, Los Angeles, CA, 90089, USA.ORCID http://orcid.org/0000-0001-5897-9707
Elaina D GrahamMarine and Environmental Biology, Department of Biological Sciences, University of Southern California, Los Angeles, CA, 90089, USA.ORCID http://orcid.org/0000-0001-5036-1929
Asa E ConoverMarine and Environmental Biology, Department of Biological Sciences, University of Southern California, Los Angeles, CA, 90089, USA.
Jake SemonesMarine and Environmental Biology, Department of Biological Sciences, University of Southern California, Los Angeles, CA, 90089, USA.
Michael D LeeBlue Marble Space Institute of Science, NASA Ames Research Center, Mountain View, CA, 94035, USA.
Yuanyuan FengCollege of Marine and Environmental Sciences, Tianjin University of Science and Technology, Tianjin, 300457, China.
Fei-Xue FuMarine and Environmental Biology, Department of Biological Sciences, University of Southern California, Los Angeles, CA, 90089, USA.
Mak A SaitoDepartment of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, MA, 02543, USA.ORCID http://orcid.org/0000-0001-6040-9295
David A HutchinsMarine and Environmental Biology, Department of Biological Sciences, University of Southern California, Los Angeles, CA, 90089, USA.ORCID http://orcid.org/0000-0002-6637-756X
University of Southern California · USAmes Research Center · USMassachusetts Institute of Technology · USTianjin University of Science and Technology · CNWoods Hole Oceanographic Institution · US

Funding

NSF | Directorate for Biological Sciences (BIO) 2125191NSF | GEO | Division of Ocean Sciences (OCE) 1657757NSF | GEO | Division of Ocean Sciences (OCE) 1850719NSF | GEO | Division of Ocean Sciences (OCE) 1851222
6 · The paper itself

Abstract

The colony-forming cyanobacteria Trichodesmium spp. are considered one of the most important nitrogen-fixing genera in the warm, low nutrient ocean. Despite this central biogeochemical role, many questions about their evolution, physiology, and trophic interactions remain unanswered. To address these questions, we describe Trichodesmium pangenomic potential via significantly improved genomic assemblies from two isolates and 15 new >50% complete Trichodesmium metagenome-assembled genomes from hand-picked, Trichodesmium colonies spanning the Atlantic Ocean. Phylogenomics identified ~four N

Identifiers

PMID36823453
PMCPMC9950141
OpenAlexW4321599581

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.