Evidence map›Paper›PMID 36823215›Full record

ArticleScientific data2023

An Open Dataset of Annotated Metaphase Cell Images for Chromosome Identification.

Jenn-Jhy Tseng, Chien-Hsing Lu, Jun-Zhou Li, Hui-Yu Lai, Min-Hu Chen, Fu-Yuan Cheng, Chih-En Kuo

Abstract readDataset
In one paragraph

Article in Scientific data, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. [Construction of a Multi-Factor Quantitative Scoring Model for Chromosome Karyotype Analysis].Sichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Exploring HSI imagery for overlapped chromosomes segmentation.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2025
    Article
  6. ChromosomeNet: Deep Learning-Based Automated Chromosome Detection in Metaphase Cell Images.IEEE open journal of engineering in medicine and biology · 2025
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jenn-Jhy TsengDepartment of Obstetrics, Gynecology and Women's Health, Taichung Veterans General Hospital, No. 1650 Sec. 4 Taiwan Blvd. Xitun Dist., Taichung, 407, Taiwan.
Chien-Hsing LuDepartment of Obstetrics, Gynecology and Women's Health, Taichung Veterans General Hospital, No. 1650 Sec. 4 Taiwan Blvd. Xitun Dist., Taichung, 407, Taiwan.
Jun-Zhou LiDepartment of Automatic Control Engineering, Feng Chia University, No. 100 Wenhua Rd. Xitun Dist., Taichung, 407, Taiwan.
Hui-Yu LaiDepartment of Obstetrics, Gynecology and Women's Health, Taichung Veterans General Hospital, No. 1650 Sec. 4 Taiwan Blvd. Xitun Dist., Taichung, 407, Taiwan.
Min-Hu ChenDepartment of Obstetrics, Gynecology and Women's Health, Taichung Veterans General Hospital, No. 1650 Sec. 4 Taiwan Blvd. Xitun Dist., Taichung, 407, Taiwan.
Fu-Yuan ChengDepartment of Obstetrics, Gynecology and Women's Health, Taichung Veterans General Hospital, No. 1650 Sec. 4 Taiwan Blvd. Xitun Dist., Taichung, 407, Taiwan.
Chih-En KuoDepartment of Applied Mathematics, National Chung Hsing University, No. 145, Xingda Rd., South Dist., Taichung, 402, Taiwan. cekuo@nchu.edu.tw.ORCID 0000-0001-6305-205X

Funding

Ministry of Science and Technology, Taiwan (Ministry of Science and Technology of Taiwan) 109-2221-E-005 -080 -MY3Ministry of Science and Technology, Taiwan (Ministry of Science and Technology of Taiwan) 111-2221-E-075A-004 -MY2Ministry of Science and Technology, Taiwan (Ministry of Science and Technology of Taiwan) 111-2634-F-005-001Taichung Veterans General Hospital (TCVGH) TCVGH-AI-10904Taichung Veterans General Hospital (TCVGH) TCVGH-AI-11003
6 · The paper itself

Abstract

Chromosomes are a principal target of clinical cytogenetic studies. While chromosomal analysis is an integral part of prenatal care, the conventional manual identification of chromosomes in images is time-consuming and costly. This study developed a chromosome detector that uses deep learning and that achieved an accuracy of 98.88% in chromosomal identification. Specifically, we compiled and made available a large and publicly accessible database containing chromosome images and annotations for training chromosome detectors. The database contains five thousand 24 chromosome class annotations and 2,000 single chromosome annotations. This database also contains examples of chromosome variations. Our database provides a reference for researchers in this field and may help expedite the development of clinical applications.

Indexed as

ChromosomesFemaleHumansMetaphasePregnancy

Identifiers

PMID36823215
PMCPMC9950090

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.