ArticleScientific data2023
Addressing barriers in FAIR data practices for biomedical data.
Abstract read
In one paragraph
Article in Scientific data, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.
0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
–field-weighted citation impact
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
29 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Building a synthesis-ready research ecosystem: fostering collaboration and open science to accelerate biomedical translation.BMC medical research methodology · 2025Pooled it
- Fragment-level FAIRness: annotating scientific data and its provenance using data fragment selectors.Journal of integrative bioinformatics · 2026Article
- Towards the digital analytical sciences in chemistry and biochemistry: from FAIR data ecosystems to artificial intelligence.Analytical and bioanalytical chemistry · 2026Review
- trAIt: Species-by-Trait Data Retrieval using Large Language Models.bioRxiv : the preprint server for biology · 2026Article
- Article
- Management discussion of laws and regulations on human genetic resources in China: a scoping review.BMC medical ethics · 2026Article
- Pharos: a mobile GIS application for network assessment and ground-truth mapping to support mHealth study design in low-resource settings.International journal of geographical information science : IJGIS · 2026Article
- FAIR data gaps and collaboration willingness among hemoglobinopathy research centers.Scientific data · 2026Article
- FAIR m-BIDS: Advancing brain data utilization through multimodal and FAIR principles.Scientific data · 2026Article
- The NIAID Discovery Portal: a unified search engine for infectious and immune-mediated disease datasets.mSystems · 2026Article
- Assessing the adoption of the FAIR principles in Italian environmental research infrastructures.Patterns (New York, N.Y.) · 2026Article
- EHItk: a toolkit for accessing Earth Hologenome Initiative data resources.Bioinformatics advances · 2026Article
- A guide to developing harmonized research workflows in a team science context.Experimental neurology · 2025Review
- Toward Sex-Specific Biomaterials Innovation: A Perspective.ACS biomaterials science & engineering · 2025Review
- Article
- Reusability challenges of livestock production data to improve animal health.Scientific data · 2025Article
- An approach to making life sciences FAIR-FAIR-DS as a tool for Aspergillus fumigatus.Database : the journal of biological databases and curation · 2025Article
- The Venus score for the assessment of the quality and trustworthiness of biomedical datasets.BioData mining · 2025Article
- The quest to share data.Frontiers in neuroinformatics · 2025Article
- Implementation of One Health surveillance systems: Opportunities and challenges - lessons learned from the OH-EpiCap application.One health (Amsterdam, Netherlands) · 2024Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
13 authors.
Laura D HughesDepartment of Integrative, Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA, 92037, USA. lhughes@scripps.edu.ORCID 0000-0003-1718-6676
Ginger TsuengDepartment of Integrative, Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA, 92037, USA.ORCID 0000-0001-9536-9115
Jack DiGiovannaVelsera, 529 Main St, Suite 6610, Charlestown, MA, 02129, USA.ORCID 0000-0002-7757-4120
Thomas D HorvathDepartment of Pathology & Immunology, Baylor College of Medicine, Houston, TX, 77030, USA.ORCID 0000-0001-9761-3484
Luke V RasmussenDepartment of Preventive Medicine, Northwestern University Feinberg School of Medicine, Chicago, IL, 60611, USA.ORCID 0000-0002-4497-8049
Tor C SavidgeDepartment of Pathology & Immunology, Baylor College of Medicine, Houston, TX, 77030, USA.
Thomas StoegerDepartment of Chemical and Biological Engineering, McCormick School of Engineering, Evanston, IL, 60208, USA.
Serdar TurkarslanInstitute for Systems Biology, Seattle, WA, 98109, USA.
Qinglong WuDepartment of Pathology & Immunology, Baylor College of Medicine, Houston, TX, 77030, USA.
Chunlei WuDepartment of Integrative, Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA, 92037, USA.ORCID 0000-0002-2629-6124
Andrew I SuDepartment of Integrative, Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA, 92037, USA.
Lars PacheInfectious and Inflammatory Disease Center, Immunity and Pathogenesis Program, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, 92037, USA.ORCID 0000-0002-4193-1042
NIAID Systems Biology Data Dissemination Working Group
Funding
WORK ORDER 126643 B539 EXPAND IC SUITE75N91019D00024 · NIAID · LEIDOS BIOMEDICAL RESEARCH, INC. · PI BRISCOE, LYNN · 2019 to 2025
$3932.6MTechnology CoreU19AI135995 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI Robert F Garry · 2018 to 2026
$32.0MSARS-CoV adaptations through a Systems Biology Lens (SYBIL)U19AI135972 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Adolfo Garcia-Sastre · 2018 to 2026
$27.2MTechnology CoreU19AI135964 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI RICHARD G WUNDERINK · 2018 to 2026
$24.7MTechnology CoreU19AI106761 · NIAID · SEATTLE BIOMEDICAL RESEARCH INSTITUTE · PI ADEREM, ALAN A, SHERMAN, DAVID R · 2013 to 2017
$18.9MTechnology CoreU19AI135976 · NIAID · SEATTLE CHILDREN'S HOSPITAL · PI ADEREM, ALAN A · 2018 to 2022
$17.0MProject 3: Functional Microbiome and Host Signatures in Transition from Commensal to pathogenP01AI152999 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI ARIAS, CESAR AUGUSTO, SAVIDGE, TOR C. · 2020 to 2025
$12.0MDecoding Antibiotic-induced Susceptibility to Clostridium difficile InfectionU01AI124290 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI BRITTON, ROBERT A, GAREY, KEVIN W · 2016 to 2020
$7.9MNCI NIH HHS 75N91019D00024NIAID NIH HHS P01 AI152999NIAID NIH HHS U01 AI124290NIAID NIH HHS U19 AI106761NIAID NIH HHS U19 AI135964NIAID NIH HHS U19 AI135972NIAID NIH HHS U19 AI135976NIAID NIH HHS U19 AI135995
Abstract
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.