Evidence map›Paper›PMID 36821378›Full record

ArticleThe Journal of clinical investigation2023

Nutrient regulation of the islet epigenome controls adaptive insulin secretion.

Matthew Wortham, Fenfen Liu, Austin R Harrington, Johanna Y Fleischman, Martina Wallace, Francesca Mulas, Medhavi Mallick, Nicholas K Vinckier, Benjamin R Cross, Joshua Chiou and 12 more

Open access · goldAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

22 authors at 5 institutions in 2 countries.

Matthew WorthamDepartments of Pediatrics and Cellular & Molecular Medicine, Pediatric Diabetes Research Center and.
Fenfen LiuDepartments of Pediatrics and Cellular & Molecular Medicine, Pediatric Diabetes Research Center and.
Austin R HarringtonDepartments of Pediatrics and Cellular & Molecular Medicine, Pediatric Diabetes Research Center and.
Johanna Y FleischmanDepartments of Pediatrics and Cellular & Molecular Medicine, Pediatric Diabetes Research Center and.
Martina WallaceDepartment of Bioengineering, UCSD, La Jolla, California, USA.
Francesca MulasDepartments of Pediatrics and Cellular & Molecular Medicine, Pediatric Diabetes Research Center and.
Medhavi MallickDepartments of Pediatrics and Cellular & Molecular Medicine, Pediatric Diabetes Research Center and.
Nicholas K VinckierDepartments of Pediatrics and Cellular & Molecular Medicine, Pediatric Diabetes Research Center and.
Benjamin R CrossDepartments of Pediatrics and Cellular & Molecular Medicine, Pediatric Diabetes Research Center and.
Joshua ChiouDepartments of Pediatrics and Cellular & Molecular Medicine, Pediatric Diabetes Research Center and.
Nisha A PatelDepartments of Pediatrics and Cellular & Molecular Medicine, Pediatric Diabetes Research Center and.
Yinghui SuiDepartments of Pediatrics and Cellular & Molecular Medicine, Pediatric Diabetes Research Center and.
Carolyn McGrailDepartments of Pediatrics and Cellular & Molecular Medicine, Pediatric Diabetes Research Center and.
Yesl JunDepartments of Pediatrics and Cellular & Molecular Medicine, Pediatric Diabetes Research Center and.
Gaowei WangDepartments of Pediatrics and Cellular & Molecular Medicine, Pediatric Diabetes Research Center and.
Ulupi S JhalaDepartments of Pediatrics and Cellular & Molecular Medicine, Pediatric Diabetes Research Center and.
Roland SchüleDepartment of Urology, University of Freiburg Medical Center, Freiburg, Germany.
Orian S ShirihaiDepartment of Molecular and Medical Pharmacology, David Geffen School of Medicine, UCLA, Los Angeles, California, USA.
Mark O HuisingDepartment of Neurobiology, Physiology and Behavior, College of Biological Sciences, and Physiology and Membrane Biology, School of Medicine, UCD, Davis, California, USA.
Kyle J GaultonDepartments of Pediatrics and Cellular & Molecular Medicine, Pediatric Diabetes Research Center and.
Christian M MetalloDepartment of Bioengineering, UCSD, La Jolla, California, USA.
Maike SanderDepartments of Pediatrics and Cellular & Molecular Medicine, Pediatric Diabetes Research Center and.
Diabetes Research CenterLa Jolla Bioengineering Institute · USUniversity of California, Davis · USUniversity of California, Los Angeles · USUniversity of Freiburg · DE

Funding

Transgenic & Knock-out MouseP30DK063491 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PETER J TONTONOZ · 2003 to 2026
$40.4M
The Human Islet Distribution Coordinating Center (UC4)UC4DK098085 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI EVANS-MOLINA, CARMELLA, NILAND, JOYCE CAROL · 2012 to 2017
$25.6M
Integrated Islet Distribution Program (U24) - 2021U24DK098085 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI Carmella Evans-Molina, Joyce Carol Niland · 2021 to 2026
$17.8M
Nkx6 gene function in pancreas developmentR01DK068471 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI WORTHAM, MATTHEW · 2004 to 2024
$6.6M
TRAINING PROGRAM IN DIABETES RESEARCHT32DK007494 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SALTIEL, ALAN R. · 1986 to 2021
$4.7M
PARACRINE FEEDBACK BY PANCREATIC DELTA CELLS TO CONTROL GLUCAGON AND INSULIN RELEASE AND MANAGE DIABETESR01DK110276 · NIDDK · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Mark O. Huising · 2017 to 2026
$3.9M
Genetic Regulation of Adiposity and Associated CVD RisksR01DK064391 · NIDDK · WRIGHT STATE UNIVERSITY · PI TOWNE, BRADFORD · 2003 to 2007
$2.7M
Diabetes risk variants affecting transcription factor-regulated cellular networksR01DK114650 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GAULTON, KYLE JEFFRIE · 2018 to 2022
$1.9M
Signaling Cascades in Regulation of Pancreatic Beta cell mass.R01DK080147 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JHALA, ULUPI S · 2008 to 2012
$1.7M
Exploiting Metabloic Defects in Tumors with Mutant IDH1 and IDH2R01CA188652 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI METALLO, CHRISTIAN MICHAEL · 2014 to 2018
$1.6M
Mechanisms of Pancreatic Beta Cell DysfunctionR01DK116038 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JHALA, ULUPI S · 2018 to 2021
$1.5M
Illumina NovaSeq 6000 Sequencing SystemS10OD026929 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JEPSEN, KRISTEN LYNN · 2019 to 2019
$600k
NCI NIH HHS R01 CA188652NIDDK NIH HHS P30 DK063491NIDDK NIH HHS R01 DK064391NIDDK NIH HHS R01 DK068471NIDDK NIH HHS R01 DK080147NIDDK NIH HHS R01 DK110276NIDDK NIH HHS R01 DK114650NIDDK NIH HHS R01 DK116038NIDDK NIH HHS R56 DK105443NIDDK NIH HHS T32 DK007494NIDDK NIH HHS UC4 DK098085NIH HHS S10 OD026929
6 · The paper itself

Abstract

Adaptation of the islet β cell insulin-secretory response to changing insulin demand is critical for blood glucose homeostasis, yet the mechanisms underlying this adaptation are unknown. Here, we have shown that nutrient-stimulated histone acetylation plays a key role in adapting insulin secretion through regulation of genes involved in β cell nutrient sensing and metabolism. Nutrient regulation of the epigenome occurred at sites occupied by the chromatin-modifying enzyme lysine-specific demethylase 1 (Lsd1) in islets. β Cell-specific deletion of Lsd1 led to insulin hypersecretion, aberrant expression of nutrient-response genes, and histone hyperacetylation. Islets from mice adapted to chronically increased insulin demand exhibited shared epigenetic and transcriptional changes. Moreover, we found that genetic variants associated with type 2 diabetes were enriched at LSD1-bound sites in human islets, suggesting that interpretation of nutrient signals is genetically determined and clinically relevant. Overall, these studies revealed that adaptive insulin secretion involves Lsd1-mediated coupling of nutrient state to regulation of the islet epigenome.

Indexed as

Diabetes Mellitus, Type 2Insulin-Secreting CellsIslets of LangerhansAnimalsEpigenomeGlucoseHistonesHumansInsulinInsulin SecretionMiceGlucoseHistonesInsulinDiabetesEndocrinologyEpigeneticsIslet cellsMetabolism

Identifiers

PMID36821378
PMCPMC10104905
OpenAlexW4321611711

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.