Evidence map›Paper›PMID 36821051›Full record

ArticleMicrobial ecology2023

Coexistence of Psychrophilic, Mesophilic, and Thermophilic Sulfate-Reducing Bacteria in a Deep Subsurface Aquifer Associated with Coal-Bed Methane Production.

Olga V Karnachuk, Inna A Panova, Igor I Rusanov, Lilia Schetinina, Olesya Y Lepokurova, Evgenia V Domrocheva, Vitaly V Kadnikov, Marat R Avakyan, Anstasia P Lukina, Liubov B Glukhova and 2 more

Abstract read
PubMed Publisher
In one paragraph

Article in Microbial ecology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Olga V KarnachukLaboratory of Biochemistry and Molecular Biology, Tomsk State University, Tomsk, 634050, Russia. olga.karnachuk@green.tsu.ru.
Inna A PanovaLaboratory of Biochemistry and Molecular Biology, Tomsk State University, Tomsk, 634050, Russia.
Igor I RusanovInstitute of Microbiology, Research Center of Biotechnology of the Russian Academy of Sciences, 119071, Moscow, Russia.
Lilia SchetininaLaboratory of Biochemistry and Molecular Biology, Tomsk State University, Tomsk, 634050, Russia.
Olesya Y LepokurovaTomsk Branch of the Trofimuk Institute of Petroleum Geology and Geophysics in the Siberian Branch of the Russian Academy of Sciences, Akademicheskiy 4, 634055, Tomsk, Russia.
Evgenia V DomrochevaTomsk Branch of the Trofimuk Institute of Petroleum Geology and Geophysics in the Siberian Branch of the Russian Academy of Sciences, Akademicheskiy 4, 634055, Tomsk, Russia.
Vitaly V KadnikovInstitute of Bioengineering, Research Center of Biotechnology of the Russian Academy of Sciences, Leninsky Prosp, Bld. 33‑2, Moscow, Russia, 119071.
Marat R AvakyanLaboratory of Biochemistry and Molecular Biology, Tomsk State University, Tomsk, 634050, Russia.
Anstasia P LukinaLaboratory of Biochemistry and Molecular Biology, Tomsk State University, Tomsk, 634050, Russia.
Liubov B GlukhovaLaboratory of Biochemistry and Molecular Biology, Tomsk State University, Tomsk, 634050, Russia.
Nikolai V PimenovInstitute of Microbiology, Research Center of Biotechnology of the Russian Academy of Sciences, 119071, Moscow, Russia.
Nikolai V RavinInstitute of Bioengineering, Research Center of Biotechnology of the Russian Academy of Sciences, Leninsky Prosp, Bld. 33‑2, Moscow, Russia, 119071.
National Research Tomsk State University · RURussian Academy of Sciences · RUInstitute of Petroleum Geology and Geophysics · RU

Funding

Russian Science Foundation 21-14-00114Russian Science Foundation 22-14-00178
6 · The paper itself

Abstract

The microbial community of subsurface environments remains understudied due to limited access to deep strata and aquifers. Coal-bed methane (CBM) production is associated with a large number of wells pumping water out of coal seams. CBM wells provide access to deep biotopes associated with coal-bed water. Temperature is one of the key constraints for the distribution and activity of subsurface microorganisms, including sulfate-reducing prokaryotes (SRP). The 16S rRNA gene amplicon sequencing coupled with in situ sulfate reduction rate (SRR) measurements with a radioactive tracer and cultivation at various temperatures revealed that the SRP community of the coal bed water of the Kuzbass coal basin is characterized by an overlapping mesophilic-psychrophilic boundary. The genus Desulfovibrio comprised a significant share of the SRP community. The D. psychrotolerans strain 1203, which has a growth optimum below 20 °C, dominated the cultivated SRP. SRR in coal bed water varied from 0.154 ± 0.07 to 2.04 ± 0.048 nmol S cm

Indexed as

DesulfovibrioGroundwaterBacteriaCoalMethaneRNA, Ribosomal, 16SSulfatesWaterCoalMethaneRNA, Ribosomal, 16SSulfatesWaterCoal-bed methaneCoal-bed water microbiomeDeep terrestrial subsurface“Desulforudis audaxviator”-cladeDesulfovibrioSulfate-reduction

Identifiers

PMID36821051
OpenAlexW4321612534

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.