Evidence map›Paper›PMID 36820885›Full record

ArticleJournal of neural transmission (Vienna, Austria : 1996)2023

Genes critical for development and differentiation of dopaminergic neurons are downregulated in Parkinson's disease.

Aditi Verma, Reddy Peera Kommaddi, Barathan Gnanabharathi, Etienne C Hirsch, Vijayalakshmi Ravindranath

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In one paragraph

Article in Journal of neural transmission (Vienna, Austria : 1996), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 27 citations in OpenAlex.

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  15. Genetic Elements at the Alpha-Synuclein Locus.Frontiers in neuroscience · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Aditi VermaCentre for Neuroscience, Indian Institute of Science, C.V. Raman Avenue, Bangalore, 560012, India.ORCID 0000-0002-6771-576X
Reddy Peera KommaddiCentre for Brain Research, Indian Institute of Science, Bangalore, 560012, India.ORCID 0000-0002-5874-944X
Barathan GnanabharathiCentre for Brain Research, Indian Institute of Science, Bangalore, 560012, India.ORCID 0000-0001-9996-0578
Etienne C HirschSorbonne Université, Institut du Cerveau - ICM, Inserm U 1127, CNRS UMR 7225, 75013, Paris, France.ORCID 0000-0003-4823-276X
Vijayalakshmi RavindranathCentre for Neuroscience, Indian Institute of Science, C.V. Raman Avenue, Bangalore, 560012, India. viji@iisc.ac.in.ORCID 0000-0003-3226-0782
Indian Institute of Science Bangalore · INCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We performed transcriptome analysis using RNA sequencing on substantia nigra pars compacta (SNpc) from mice after acute and chronic 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP) treatment and from Parkinson's disease (PD) patients. Acute and chronic exposure to MPTP resulted in decreased expression of genes involved in sodium channel regulation. However, upregulation of pro-inflammatory pathways was seen after single dose but not after chronic MPTP treatment. Dopamine biosynthesis and synaptic vesicle recycling pathways were downregulated in PD patients and after chronic MPTP treatment in mice. Genes essential for midbrain development and determination of dopaminergic phenotype such as, LMX1B, FOXA1, RSPO2, KLHL1, EBF3, PITX3, RGS4, ALDH1A1, RET, FOXA2, EN1, DLK1, GFRA1, LMX1A, NR4A2, GAP43, SNCA, PBX1, and GRB10 were downregulated in human PD and overexpression of GFP tagged LMX1B rescued MPP

Indexed as

NeuroblastomaParkinson DiseaseAnimalsDisease Models, AnimalDopamineDopaminergic NeuronsDown-RegulationHumansMiceMice, Inbred C57BLMicrofilament ProteinsSubstantia NigraTranscription FactorsDopamineEBF3 protein, humanKLHL1 protein, humanMicrofilament ProteinsTranscription FactorsLMX1BNeurodegenerationRNA-seqSH-SY5YSubstantia nigra

Identifiers

PMID36820885
OpenAlexW4321600412

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.