Evidence map›Paper›PMID 36819013›Full record

ArticleFrontiers in microbiology2023

A dark matter in

Kohei Ito, Ryo Niwa, Ken Kobayashi, Tomoyuki Nakagawa, Genki Hoshino, Yuji Tsuchida

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
6.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 31 citations in OpenAlex.

  1. Comparative genomic analysis ofMicrobiology (Reading, England) · 2025
    Article
  2. Article
  3. Article
  4. Review
  5. Lot-to-lot variation in the microbiota during the brewing process ofBioscience of microbiota, food and health · 2024
    Article
  6. Article
  7. Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Kohei ItoBIOTA Inc., Tokyo, Japan.
Ryo NiwaBIOTA Inc., Tokyo, Japan.
Ken KobayashiBIOTA Inc., Tokyo, Japan.
Tomoyuki NakagawaFaculty of Applied Biological Sciences, Gifu University, Gifu, Japan.
Genki HoshinoTsuchida Sake Brewing Company, Gunma, Japan.
Yuji TsuchidaTsuchida Sake Brewing Company, Gunma, Japan.
National Research Institute of Brewing · JPGifu University · JPKyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: In Methods: In this study, we performed 16S rRNA amplicon sequencing analysis after sampling from floor, equipment surfaces, and raw materials for making fermentation starters, including Results: Amplicon sequence variants (ASVs) between the external environments and the fermentation starter were compared, and it was verified that the microorganisms in the external environments, such as built environments, equipment surfaces, and raw materials in the sake brewery, were introduced into the fermentation starter. Furthermore, various adventitious microbes present in the fermentation starter of early days and from the external environments were detected in a nonnegligible proportion in the starter, which may impact the taste and flavor. Discussion: These findings illuminate the uncharacterized microbial dark matter of sake brewing, the sources of microbes in Kimoto-style fermentation.

Indexed as

Japanese sakeKimoto-styleKuratsukimicrobial fermentationmicrobiome

Identifiers

PMID36819013
PMCPMC9933502
OpenAlexW4318978803

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.