Evidence map›Paper›PMID 36818176›Full record

ArticleJournal of Taibah University Medical Sciences2023

Reinstating apoptosis using putative Bcl-xL natural product inhibitors: Molecular docking and ADMETox profiling investigations.

Ibrahim Damilare Boyenle, Abdeen Tunde Ogunlana, Abdul-Quddus Kehinde Oyedele, Babatunde Kazeem Olokodana, Nurudeen Owolabi, Abdulmalik Salahudeen, Oluwafemi Timothy Aderenle, Taiwo Oluwafisayomi Oloyede, Temitope Isaac Adelusi

Open access · goldAbstract read
In one paragraph

Article in Journal of Taibah University Medical Sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 8 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Ibrahim Damilare BoyenleDepartment of Nursing Science, College of Health Science, Crescent University, Abeokuta, Nigeria.
Abdeen Tunde OgunlanaComputational Biology/Drug Discovery Laboratory, Department of Biochemistry, Ladoke Akintola University of Technology, Nigeria.
Abdul-Quddus Kehinde OyedeleComputational Biology/Drug Discovery Laboratory, Department of Biochemistry, Ladoke Akintola University of Technology, Nigeria.
Babatunde Kazeem OlokodanaDepartment of Nursing Science, College of Health Science, Crescent University, Abeokuta, Nigeria.
Nurudeen OwolabiDepartment of Biochemistry, Ladoke Akintola University of Technology, Nigeria.
Abdulmalik SalahudeenDepartment of Pure and Applied Chemistry, Ladoke Akintola University of Technology, Ogbomoso, Nigeria.
Oluwafemi Timothy AderenleDepartment of Biochemistry, Ladoke Akintola University of Technology, Nigeria.
Taiwo Oluwafisayomi OloyedeDepartment of Biochemistry, Ladoke Akintola University of Technology, Nigeria.
Temitope Isaac AdelusiComputational Biology/Drug Discovery Laboratory, Department of Biochemistry, Ladoke Akintola University of Technology, Nigeria.
Ladoke Akintola University of Technology · NGCrescent University · NGNigerian Institute of Medical Research · NG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objectives: While a fine balance in the pro-apoptotic and anti-apoptotic family members of the B-cell lymphoma-2 (Bcl-2) protein family represents a normal signaling profile, a tilt in balance towards anti-apoptotic family members has fortified different forms of cancers with survival advantage and resistance against treatment. Induction of apoptosis is a key therapeutic approach in cancer drug discovery, and the inhibition of the anti-apoptotic B cell lymphoma extra-large (Bcl-xL) is a long-standing clinical target for cancer therapy. In this study, we combined computer-aided approaches to report putative binders for this target. Methods: Before our virtual screening campaign, we conducted a redocking experiment strategy of the x-ray bound inhibitor of the Bcl-xL protein with some of the available docking software at our disposal to determine the software with the best efficiency for this screening. iGEMDOCK emerged to reproduce the x-ray crystallographic information and was used to dock the library of ligand, which was developed from diverse literature reporting compounds with anti-apoptotic profiles through the Bcl-2 family. Results: Of the compounds in the library, alpha-mangostin and oubain scored as hits with binding energy values of -123.025 kcal/mol and -122.271 kcal/mol, respectively, which is more than -120.8 kcal/mol observed by the standard. Conclusions: These compounds revealed a more binding affinity potential than ABT-737, which is a standard inhibitor of the protein. In addition, these scaffolds not only interact with relevant and hotspot residues for the inhibition of Bcl-xL but also possess good pharmacokinetic and excellent toxicity, an endpoint that should be considered for further testing and drug development.

Indexed as

ApoptosisBcl-2 familyBcl-xLMolecular dockingVirtual screening

Identifiers

PMID36818176
PMCPMC9906007
OpenAlexW4309043349

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.