Evidence map›Paper›PMID 36816359›Full record

ArticleJournal of oncology2023

SMYD Family Members Serve as Potential Prognostic Markers and Correlate with Immune Infiltrates in Gastric Cancer.

Donghui Liu, Menglin Liu, Wenxin Wang, Xiaoxue Li, Enhong Shi, Chenyao Zhang, Yinghui Wang, Yan Zhang, Liru Wang, Xuyao Wang

Abstract read
In one paragraph

Article in Journal of oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Donghui LiuSchool of Life Science and Technology, Harbin Institute of Technology, Harbin 150000, Heilongjiang Province, China.
Menglin LiuDepartment of Oncology, Heilongjiang Provincial Hospital, Harbin 150000, Heilongjiang Province, China.
Wenxin WangDepartment of Oncology, Heilongjiang Provincial Hospital, Harbin 150000, Heilongjiang Province, China.
Xiaoxue LiDepartment of Oncology, Heilongjiang Provincial Hospital, Harbin 150000, Heilongjiang Province, China.
Enhong ShiDepartment of Oncology, Heilongjiang Provincial Hospital, Harbin 150000, Heilongjiang Province, China.
Chenyao ZhangDepartment of Oncology, Heilongjiang Provincial Hospital, Harbin 150000, Heilongjiang Province, China.
Yinghui WangDepartment of Oncology, Heilongjiang Provincial Hospital, Harbin 150000, Heilongjiang Province, China.
Yan ZhangSchool of Life Science and Technology, Harbin Institute of Technology, Harbin 150000, Heilongjiang Province, China.ORCID https://orcid.org/0000-0002-5307-2484
Liru WangSchool of Life Science and Technology, Harbin Institute of Technology, Harbin 150000, Heilongjiang Province, China.ORCID https://orcid.org/0000-0001-9705-3560
Xuyao WangDepartment of Pharmacy, Harbin Second Hospital, Harbin 150000, Heilongjiang Province, China.ORCID https://orcid.org/0000-0001-7895-8022

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: The SMYD family comprises a group of genes encoding lysine methyltransferases, which are closely related to tumorigenesis. However, a systematic understanding of their role in gastric cancer (GC) is lacking. Methods: Using databases and tools such as the Cancer Genome Atlas, Human Protein Atlas, Kaplan-Meier Plotter, Gene Expression Profiling Interactive Analysis, and Metascape, we comprehensively analyzed differences in SMYD expression and its prognostic value as well as the association of SMYDs with immune cell infiltration, tumor mutational burden (TMB), and microsatellite instability (MSI). We conducted functional enrichment analysis and explored a competing endogenous RNA mechanism regulating SMYD mRNA and protein levels in patients with GC. Results: In GC, the expression of SMYD2/3/4/5 mRNA was significantly upregulated, as opposed to that of Conclusion: SMYDs are differentially expressed in GC and are thus potential prognostic markers. SMYD expression is closely related to immune infiltration, TMB, and MSI, all of which are closely related to the response to targeted immune therapy.

Identifiers

PMID36816359
PMCPMC9929213

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.