Evidence map›Paper›PMID 36815791›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2023

Application of Genomic Sequencing to Refine Patient Stratification for Adjuvant Therapy in Renal Cell Carcinoma.

Naveen S Vasudev, Ghislaine Scelo, Kate I Glennon, Michelle Wilson, Louis Letourneau, Robert Eveleigh, Nazanin Nourbehesht, Madeleine Arseneault, Antoine Paccard, Lars Egevad and 34 more

Open access · hybridAbstract read
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Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

44 authors at 20 institutions in 12 countries.

Naveen S Vasudev *Leeds Institute of Medical Research at St James's, University of Leeds, St James's University Hospital, Leeds, United Kingdom.ORCID 0000-0001-8470-7481
Ghislaine Scelo *World Health Organisation (WHO), International Agency for Research on Cancer (IARC), The Genomic Epidemiology Branch, Lyon, France.ORCID 0000-0002-2692-8507
Kate I Glennon *Victor Philip Dahdaleh Institute of Genomic Medicine at McGill University, Montreal, Québec, Canada.ORCID 0000-0002-4923-0822
Michelle WilsonLeeds Institute of Medical Research at St James's, University of Leeds, St James's University Hospital, Leeds, United Kingdom.ORCID 0000-0001-7556-1599
Louis LetourneauVictor Philip Dahdaleh Institute of Genomic Medicine at McGill University, Montreal, Québec, Canada.ORCID 0000-0002-1673-5744
Robert EveleighVictor Philip Dahdaleh Institute of Genomic Medicine at McGill University, Montreal, Québec, Canada.ORCID 0000-0002-4147-382X
Nazanin NourbeheshtVictor Philip Dahdaleh Institute of Genomic Medicine at McGill University, Montreal, Québec, Canada.ORCID 0000-0002-5748-2974
Madeleine ArseneaultVictor Philip Dahdaleh Institute of Genomic Medicine at McGill University, Montreal, Québec, Canada.ORCID 0000-0002-9101-8462
Antoine PaccardVictor Philip Dahdaleh Institute of Genomic Medicine at McGill University, Montreal, Québec, Canada.ORCID 0000-0003-0738-5540
Lars EgevadDepartment of Oncology-Pathology, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0001-8531-222X
Juris ViksnaInstitute of Mathematics and Computer Science, University of Latvia, Riga, Latvia.ORCID 0000-0003-2283-2978
Edgars CelmsInstitute of Mathematics and Computer Science, University of Latvia, Riga, Latvia.ORCID 0000-0001-9608-3792
Sharon M JacksonLeeds Institute of Medical Research at St James's, University of Leeds, St James's University Hospital, Leeds, United Kingdom.ORCID 0000-0002-3823-7375
Behnoush Abedi-ArdekaniWorld Health Organisation (WHO), International Agency for Research on Cancer (IARC), The Genomic Epidemiology Branch, Lyon, France.ORCID 0000-0002-0980-0587
Anne Y WarrenDepartment of Histopathology, Cambridge University Hospitals NHS Foundation Trust, Hills Road, Cambridge, United Kingdom.ORCID 0000-0002-1170-7867
Peter J SelbyLeeds Institute of Medical Research at St James's, University of Leeds, St James's University Hospital, Leeds, United Kingdom.ORCID 0000-0002-3782-069X
Sebastian TrainorLeeds Institute of Medical Research at St James's, University of Leeds, St James's University Hospital, Leeds, United Kingdom.ORCID 0000-0003-3840-4142
Michael KimuliPyrah Department of Urology, Leeds Teaching Hospitals NHS Trust, Lincoln Wing, St James's University Hospital, Leeds, United Kingdom.ORCID 0000-0002-0372-5299
Jon CartledgePyrah Department of Urology, Leeds Teaching Hospitals NHS Trust, Lincoln Wing, St James's University Hospital, Leeds, United Kingdom.ORCID 0000-0002-0512-0787
Naeem SoomroNewcastle Upon Tyne Hospitals NHS Foundation Trust, Newcastle upon Tyne, United Kingdom.ORCID 0000-0002-5203-7695
Adebanji AdeyojuStockport NHS Foundation Trust, Stockport, United Kingdom.ORCID 0000-0003-4010-5985
Poulam M PatelDivision of Cancer & Stem Cells, School of Medicine, University of Nottingham, Nottingham, United Kingdom.ORCID 0000-0002-1978-4066
Magdalena B WozniakWorld Health Organisation (WHO), International Agency for Research on Cancer (IARC), The Genomic Epidemiology Branch, Lyon, France.ORCID 0000-0002-4411-2747
Ivana HolcatovaCharles University in Prague, First Faculty of Medicine, Institute of Hygiene and Epidemiology, Prague, Czech Republic.ORCID 0000-0002-1366-0337
Antonin BrisudaUniversity Hospital Motol, Prague, Czech Republic.ORCID 0000-0001-5103-1358
Vladimir JanoutFaculty of Health Sciences, Palacky University, Olomouc, Czech Republic.ORCID 0000-0002-1163-0361
Estelle ChanudetWorld Health Organisation (WHO), International Agency for Research on Cancer (IARC), The Genomic Epidemiology Branch, Lyon, France.ORCID 0000-0002-2095-9791
David ZaridzeN.N. Blokhin National Medical Research Centre of Oncology, Moscow, Russian Federation.ORCID 0000-0002-2824-3704
Anush MoukeriaN.N. Blokhin National Medical Research Centre of Oncology, Moscow, Russian Federation.ORCID 0000-0002-6847-9295
Oxana ShanginaN.N. Blokhin National Medical Research Centre of Oncology, Moscow, Russian Federation.ORCID 0000-0003-2431-068X
Lenka ForetovaDepartment of Cancer Epidemiology and Genetics, Masaryk Memorial Cancer Institute, Brno, Czech Republic.ORCID 0000-0003-0494-2620
Marie NavratilovaDepartment of Cancer Epidemiology and Genetics, Masaryk Memorial Cancer Institute, Brno, Czech Republic.ORCID 0000-0003-1626-0694
Dana MatesNational Institute of Public Health, Bucuresti, Romania.ORCID 0000-0002-6219-9807
Viorel JingaCarol Davila University of Medicine and Pharmacy, Prof. Dr. Th. Burghele Clinical Hospital, Bucharest, Romania.ORCID 0000-0001-7632-5328
Ljiljana BogdanovicInstitute of Pathology, School of Medicine Belgrade, University of Belgrade, Belgrade, Serbia.ORCID 0000-0002-6863-8639
Bozidar KovacevicInstitute of Pathology and Forensic Medicine, Military Medical Academy, Belgrade, Serbia.ORCID 0000-0002-3270-0170
Anne Cambon-ThomsenInstitut National de la Santé et de la Recherche Médicale (INSERM) and Université Toulouse III Paul Sabatier (UPS), Toulouse, France.ORCID 0000-0001-8793-3644
Guillaume BourqueVictor Philip Dahdaleh Institute of Genomic Medicine at McGill University, Montreal, Québec, Canada.ORCID 0000-0002-3933-9656
Alvis BrazmaEuropean Bioinformatics Institute, European Molecular Biology Laboratory, EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, United Kingdom.ORCID 0000-0001-5988-7409
Jörg TostCentre National de Recherche en Génomique Humaine, CEA - Institut de Biologie Francois Jacob, University Paris Saclay, Evry, France.ORCID 0000-0002-2683-0817
Paul BrennanWorld Health Organisation (WHO), International Agency for Research on Cancer (IARC), The Genomic Epidemiology Branch, Lyon, France.ORCID 0000-0002-0518-8714
Mark LathropVictor Philip Dahdaleh Institute of Genomic Medicine at McGill University, Montreal, Québec, Canada.ORCID 0000-0002-2660-7105
Yasser Riazalhosseini *Victor Philip Dahdaleh Institute of Genomic Medicine at McGill University, Montreal, Québec, Canada.ORCID 0000-0003-0875-618X
Rosamonde E Banks *Leeds Institute of Medical Research at St James's, University of Leeds, St James's University Hospital, Leeds, United Kingdom.ORCID 0000-0002-0042-8715
McGill Genome Centre · CASt James's University Hospital · GBCentre international de recherche sur le cancer · FRRussian Cancer Research Center NN Blokhin · RULeeds Teaching Hospitals NHS Trust · GBMasaryk Memorial Cancer Institute · CZUniversity of Latvia · LVCambridge University Hospitals NHS Foundation Trust · GBCarol Davila University of Medicine and Pharmacy · ROCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FREuropean Bioinformatics Institute · GBInstitute of Public Health Bengaluru · INKarolinska Institutet · SEMilitary Medical Academy · RSNational Institute Of Hygiene And Epidemiology · VNNewcastle upon Tyne Hospitals NHS Foundation Trust · GBPalacký University Olomouc · CZStockport NHS Foundation Trust · GBUniversité Toulouse III - Paul Sabatier · FRUniversity Hospital in Motol · CZ

Funding

World Health Organization 001
6 · The paper itself

Abstract

purposePatients with resected localized clear-cell renal cell carcinoma (ccRCC) remain at variable risk of recurrence. Incorporation of biomarkers may refine risk prediction and inform adjuvant treatment decisions. We explored the role of tumor genomics in this setting, leveraging the largest cohort to date of localized ccRCC tissues subjected to targeted gene sequencing. EXPERIMENTAL

designThe somatic mutation status of 12 genes was determined in 943 ccRCC cases from a multinational cohort of patients, and associations to outcomes were examined in a Discovery (n = 469) and Validation (n = 474) framework.

resultsTumors containing a von-Hippel Lindau (VHL) mutation alone were associated with significantly improved outcomes in comparison with tumors containing a VHL plus additional mutations. Within the Discovery cohort, those with VHL+0, VHL+1, VHL+2, and VHL+≥3 tumors had disease-free survival (DFS) rates of 90.8%, 80.1%, 68.2%, and 50.7% respectively, at 5 years. This trend was replicated in the Validation cohort. Notably, these genomically defined groups were independent of tumor mutational burden. Amongst patients eligible for adjuvant therapy, those with a VHL+0 tumor (29%) had a 5-year DFS rate of 79.3% and could, therefore, potentially be spared further treatment. Conversely, patients with VHL+2 and VHL+≥3 tumors (32%) had equivalent DFS rates of 45.6% and 35.3%, respectively, and should be prioritized for adjuvant therapy.

conclusionsGenomic characterization of ccRCC identified biologically distinct groups of patients with divergent relapse rates. These groups account for the ∼80% of cases with VHL mutations and could be used to personalize adjuvant treatment discussions with patients as well as inform future adjuvant trial design.

Indexed as

Carcinoma, Renal CellKidney NeoplasmsHumansMutationNeoplasm Recurrence, LocalVon Hippel-Lindau Tumor Suppressor ProteinVon Hippel-Lindau Tumor Suppressor Protein

Identifiers

PMID36815791
PMCPMC10068441
OpenAlexW4321611729

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.