Evidence map›Paper›PMID 36814393›Full record

ArticleThe Plant cell2023

Loss of OPT3 function decreases phloem copper levels and impairs crosstalk between copper and iron homeostasis and shoot-to-root signaling in Arabidopsis thaliana.

Ju-Chen Chia, Jiapei Yan, Maryam Rahmati Ishka, Marta Marie Faulkner, Eli Simons, Rong Huang, Louisa Smieska, Arthur Woll, Ryan Tappero, Andrew Kiss and 6 more

Abstract read
In one paragraph

Article in The Plant cell, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
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  17. Article
  18. Genetic basis of the historical iron-accumulating dgl and brz mutants in pea.The Plant journal : for cell and molecular biology · 2024
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors.

Ju-Chen ChiaSoil and Crop Sciences Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0002-7498-5071
Jiapei YanSoil and Crop Sciences Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0003-2573-2702
Maryam Rahmati IshkaSoil and Crop Sciences Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0002-5447-643X
Marta Marie FaulknerSoil and Crop Sciences Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0002-3033-2431
Eli SimonsSoil and Crop Sciences Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0001-9381-967X
Rong HuangCornell High Energy Synchrotron Source (CHESS), Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0003-0215-4823
Louisa SmieskaCornell High Energy Synchrotron Source (CHESS), Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0001-8150-1920
Arthur WollCornell High Energy Synchrotron Source (CHESS), Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0001-8925-2199
Ryan TapperoNational Light Source II, Brookhaven National Laboratory, Upton, NY 11973, USA.ORCID 0000-0002-3560-2461
Andrew KissNational Light Source II, Brookhaven National Laboratory, Upton, NY 11973, USA.ORCID 0000-0002-8515-5508
Chen JiaoBoyce Thompson Institute for Plant Research, Ithaca, NY 14853, USA.ORCID 0000-0002-3327-0547
Zhangjun FeiBoyce Thompson Institute for Plant Research, Ithaca, NY 14853, USA.ORCID 0000-0001-9684-1450
Leon V KochianRobert W. Holley Center for Agriculture and Health, USDA-ARS, NY 14853, USA.ORCID 0000-0003-3416-089X
Elsbeth WalkerDepartment of Biology, University of Massachusetts, MA 01003, USA.ORCID 0000-0003-4237-9920
Miguel PiñerosPlant Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0002-7166-1848
Olena K VatamaniukSoil and Crop Sciences Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0003-2713-3797

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Copper (Cu) and iron (Fe) are essential micronutrients that are toxic when accumulating in excess in cells. Thus, their uptake by roots is tightly regulated. While plants sense and respond to local Cu availability, the systemic regulation of Cu uptake has not been documented in contrast to local and systemic control of Fe uptake. Fe abundance in the phloem has been suggested to act systemically, regulating the expression of Fe uptake genes in roots. Consistently, shoot-to-root Fe signaling is disrupted in Arabidopsis thaliana mutants lacking the phloem companion cell-localized Fe transporter, OLIGOPEPTIDE TRANSPORTER 3 (AtOPT3). We report that AtOPT3 also transports Cu in heterologous systems and contributes to its delivery from sources to sinks in planta. The opt3 mutant contained less Cu in the phloem, was sensitive to Cu deficiency and mounted a transcriptional Cu deficiency response in roots and young leaves. Feeding the opt3 mutant and Cu- or Fe-deficient wild-type seedlings with Cu or Fe via the phloem in leaves downregulated the expression of both Cu- and Fe-deficiency marker genes in roots. These data suggest the existence of shoot-to-root Cu signaling, highlight the complexity of Cu/Fe interactions, and the role of AtOPT3 in fine-tuning root transcriptional responses to the plant Cu and Fe needs.

Indexed as

ArabidopsisArabidopsis ProteinsCopperHomeostasisIronMembrane Transport ProteinsPhloemPlantsArabidopsis ProteinsCopperIronMembrane Transport ProteinsOPT3 protein, Arabidopsis

Identifiers

PMID36814393
PMCPMC10226573

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.