Evidence map›Paper›PMID 36812206›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

Bayesian inference in ring attractor networks.

Anna Kutschireiter, Melanie A Basnak, Rachel I Wilson, Jan Drugowitsch

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Cortex-Wide Substrates for Body Schema and Action Awareness.bioRxiv : the preprint server for biology · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Self-motion perception and sequential decision-making: where are we heading?Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2023
    Review
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Anna KutschireiterDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115.ORCID 0000-0002-7592-3286
Melanie A BasnakDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115.
Rachel I WilsonDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115.
Jan DrugowitschDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115.ORCID 0000-0002-7846-0408

Funding

The encoding of uncertainty in the Drosophila compass systemR34NS123819 · NINDS · HARVARD MEDICAL SCHOOL · PI DRUGOWITSCH, JAN, WILSON, RACHEL · 2021 to 2021
$762k
NINDS NIH HHS R34 NS123819Swiss National Science Foundation P2ZHP2 184213
6 · The paper itself

Abstract

Working memories are thought to be held in attractor networks in the brain. These attractors should keep track of the uncertainty associated with each memory, so as to weigh it properly against conflicting new evidence. However, conventional attractors do not represent uncertainty. Here, we show how uncertainty could be incorporated into an attractor, specifically a ring attractor that encodes head direction. First, we introduce a rigorous normative framework (the circular Kalman filter) for benchmarking the performance of a ring attractor under conditions of uncertainty. Next, we show that the recurrent connections within a conventional ring attractor can be retuned to match this benchmark. This allows the amplitude of network activity to grow in response to confirmatory evidence, while shrinking in response to poor-quality or strongly conflicting evidence. This "Bayesian ring attractor" performs near-optimal angular path integration and evidence accumulation. Indeed, we show that a Bayesian ring attractor is consistently more accurate than a conventional ring attractor. Moreover, near-optimal performance can be achieved without exact tuning of the network connections. Finally, we use large-scale connectome data to show that the network can achieve near-optimal performance even after we incorporate biological constraints. Our work demonstrates how attractors can implement a dynamic Bayesian inference algorithm in a biologically plausible manner, and it makes testable predictions with direct relevance to the head direction system as well as any neural system that tracks direction, orientation, or periodic rhythms.

Indexed as

BrainNeural Networks, ComputerBayes TheoremHeadMemory, Short-TermModels, NeurologicalBayesian inferencehead direction neuronsKalman filterring attractor networksworking memory

Identifiers

PMID36812206
PMCPMC9992764

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.