Evidence map›Paper›PMID 36811254›Full record

ArticleHippocampus2023

Neuronal activity-related transcription is blunted in immature compared to mature dentate granule cells.

Sarah L Parylak, Fan Qiu, Sara B Linker, Iryna S Gallina, Christina K Lim, David Preciado, Aidan H McDonald, Xavier Zhou, Fred H Gage

Open access · bronzeAbstract read
In one paragraph

Article in Hippocampus, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Sarah L ParylakLaboratory of Genetics, The Salk Institute for Biological Studies, La Jolla, California, USA.
Fan QiuLaboratory of Genetics, The Salk Institute for Biological Studies, La Jolla, California, USA.
Sara B LinkerLaboratory of Genetics, The Salk Institute for Biological Studies, La Jolla, California, USA.
Iryna S GallinaLaboratory of Genetics, The Salk Institute for Biological Studies, La Jolla, California, USA.
Christina K LimLaboratory of Genetics, The Salk Institute for Biological Studies, La Jolla, California, USA.
David PreciadoLaboratory of Genetics, The Salk Institute for Biological Studies, La Jolla, California, USA.
Aidan H McDonaldLaboratory of Genetics, The Salk Institute for Biological Studies, La Jolla, California, USA.
Xavier ZhouLaboratory of Genetics, The Salk Institute for Biological Studies, La Jolla, California, USA.
Fred H GageLaboratory of Genetics, The Salk Institute for Biological Studies, La Jolla, California, USA.ORCID 0000-0002-0938-4106
Salk Institute for Biological Studies · US

Funding

Viral Vector Core (VVC)P30CA014195 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI Ye Zheng · 1985 to 2026
$82.8M
UCSD Shiley-Marcos Alzheimer's Disease Research Center P30P30AG062429 · NIA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Steven Dyal Edland · 2019 to 2026
$34.9M
Dynamics of activity-induced transcription in single dentate granule cellsR01MH114030 · NIMH · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI FRED H GAGE · 2017 to 2026
$3.8M
American Heart Association-American Stroke Association 19PABHI34610000NCI NIH HHS P30 CA014195NIA NIH HHS P30 AG062429NIMH NIH HHS R01 MH114030
6 · The paper itself

Abstract

Immature dentate granule cells (DGCs) generated in the hippocampus during adulthood are believed to play a unique role in dentate gyrus (DG) function. Although immature DGCs have hyperexcitable membrane properties in vitro, the consequences of this hyperexcitability in vivo remain unclear. In particular, the relationship between experiences that activate the DG, such as exploration of a novel environment (NE), and downstream molecular processes that modify DG circuitry in response to cellular activation is unknown in this cell population. We first performed quantification of immediate early gene (IEG) proteins in immature (5-week-old) and mature (13-week-old) DGCs from mice exposed to a NE. Paradoxically, we observed lower IEG protein expression in hyperexcitable immature DGCs. We then isolated nuclei from active and inactive immature DGCs and performed single-nuclei RNA-Sequencing. Compared to mature nuclei collected from the same animal, immature DGC nuclei showed less activity-induced transcriptional change, even though they were classified as active based on expression of ARC protein. These results demonstrate that the coupling of spatial exploration, cellular activation, and transcriptional change differs between immature and mature DGCs, with blunted activity-induced changes in immature cells.

Indexed as

Dentate GyrusNeuronsAnimalsHippocampusMiceNeurogenesisadult neurogenesisArcdentate gyrushippocampusimmediate early genesingle-nuclei RNA-seqSmart-Seq2

Identifiers

PMID36811254
PMCPMC10985790
OpenAlexW4321496331

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.