Evidence map›Paper›PMID 36810759›Full record

ArticleScientific reports2023

Mammalian pumilio proteins control cellular morphology, migration, and adhesion.

Erin L Sternburg, Jordan J Lillibridge, Rattapol Phandthong, Fedor V Karginov

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Erin L SternburgDepartment of Molecular, Cell and Systems Biology, University of California at Riverside, Riverside, CA, 92521, USA.
Jordan J LillibridgeDepartment of Molecular, Cell and Systems Biology, University of California at Riverside, Riverside, CA, 92521, USA.
Rattapol PhandthongDepartment of Molecular, Cell and Systems Biology, University of California at Riverside, Riverside, CA, 92521, USA.
Fedor V KarginovDepartment of Molecular, Cell and Systems Biology, University of California at Riverside, Riverside, CA, 92521, USA. karginov@ucr.edu.
University of California, Riverside · US

Funding

Interactions Between Pum1 and microRNAs in Cerebellar AtaxiaR21NS118390 · NINDS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI KARGINOV, FEDOR V · 2020 to 2020
$412k
NINDS NIH HHS R21 NS118390
6 · The paper itself

Abstract

Pumilio proteins are RNA-binding proteins that control mRNA translation and stability by binding to the 3' UTR of target mRNAs. Mammals have two canonical Pumilio proteins, PUM1 and PUM2, which are known to act in many biological processes, including embryonic development, neurogenesis, cell cycle regulation and genomic stability. Here, we characterized a new role of both PUM1 and PUM2 in regulating cell morphology, migration, and adhesion in T-REx-293 cells, in addition to previously known defects in growth rate. Gene ontology analysis of differentially expressed genes in PUM double knockout (PDKO) cells for both cellular component and biological process showed enrichment in categories related to adhesion and migration. PDKO cells had a collective cell migration rate significantly lower than that of WT cells and displayed changes in actin morphology. In addition, during growth, PDKO cells aggregated into clusters (clumps) due to an inability to escape cell-cell contacts. Addition of extracellular matrix (Matrigel) alleviated the clumping phenotype. Collagen IV (ColIV), a major component of Matrigel, was shown to be the driving force in allowing PDKO cells to monolayer appropriately, however, ColIV protein levels remained unperturbed in PDKO cells. This study characterizes a novel cellular phenotype associated with cellular morphology, migration, and adhesion which can aid in developing better models for PUM function in both developmental processes and disease.

Indexed as

Protein BiosynthesisRNA-Binding ProteinsAnimalsMammalsPhenotypeRNA, MessengerRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID36810759
PMCPMC9944931
OpenAlexW4321455568

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.