Evidence map›Paper›PMID 36810725›Full record

ArticleEuropean journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology2023

Development of a rapid diagnostic test based on loop-mediated isothermal amplification to identify the most frequent non-typhoidal Salmonella serovars from culture.

Birgit Edel, Stefan Glöckner, Sylvia Stoll, Nora Lindig, Katharina Boden, Lars Wassill, Sandra Simon, Bettina Löffler, Jürgen Rödel

Abstract read
In one paragraph

Article in European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. A Dual-Gene Colorimetric LAMP Assay for Genus-Level Detection ofInternational journal of molecular sciences · 2025
    Article
  2. Recent Developments onFoods (Basel, Switzerland) · 2025
    Review
  3. Article
  4. Article
  5. One-tube detection ofMicrobiology spectrum · 2024
    Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Birgit EdelInstitute of Medical Microbiology, Jena University Hospital, Friedrich Schiller University of Jena, Jena, Germany.
Stefan GlöcknerInstitute of Medical Microbiology, Jena University Hospital, Friedrich Schiller University of Jena, Jena, Germany.
Sylvia StollInstitute of Medical Microbiology, Jena University Hospital, Friedrich Schiller University of Jena, Jena, Germany.
Nora LindigInstitute of Medical Microbiology, Jena University Hospital, Friedrich Schiller University of Jena, Jena, Germany.
Katharina BodenSynlab MVZ Weiden GmbH, MVZ Thuringia, Oncoscreen, Jena, Germany.
Lars WassillAmplex Diagnostics GmbH, Gars-Bahnhof, Germany.
Sandra SimonDivision of Enteropathogenic Bacteria and Legionella, National Reference Centre for Salmonella and Other Enteric Bacterial Pathogens, Robert Koch Institute, Wernigerode, Germany.
Bettina LöfflerInstitute of Medical Microbiology, Jena University Hospital, Friedrich Schiller University of Jena, Jena, Germany.
Jürgen RödelInstitute of Medical Microbiology, Jena University Hospital, Friedrich Schiller University of Jena, Jena, Germany. juergen.roedel@med.uni-jena.de.ORCID http://orcid.org/0000-0003-3893-0679

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Identification of Salmonella serovars is performed by conventional seroagglutination or sequencing. These methods are labor-intensive and require technical experience. An easy-to-perform assay allowing the timely identification of the most common non-typhoidal serovars (NTS) is needed. In this study, a molecular assay based on loop-mediated isothermal amplification (LAMP) targeting specific gene sequences of Salmonella Enteritidis, S. Typhimurium, S. Infantis, S. Derby, and S. Choleraesuis has been developed for rapid serovar identification from cultured colonies. A total of 318 Salmonella strains and 25 isolates of other Enterobacterales species that served as negative controls were analyzed. All S. Enteritidis (n = 40), S. Infantis (n = 27), and S. Choleraesuis (n = 11) strains were correctly identified. Seven out of 104 S. Typhimurium and 10 out of 38 S. Derby strains missed a positive signal. Cross-reactions of the gene targets were only rarely observed and restricted to the S. Typhimurium primer set (5 false-positives). Sensitivity and specificity of the assay compared to seroagglutination were as follows: 100% and 100% for S. Enteritidis, 93.3% and 97.7% for S. Typhimurium, 100% and 100% for S. Infantis, 73.7% and 100% for S. Derby, and 100% and 100% for S. Choleraesuis, respectively. With results available in just a few minutes of hands-on time and a test run time of 20 min, the LAMP assay developed here may be a useful tool for the rapid identification of common Salmonella NTS in daily routine diagnostics.

Indexed as

Rapid Diagnostic TestsTyphoid FeverHumansMolecular Diagnostic TechniquesNucleic Acid Amplification TechniquesSalmonella enteritidisSerogroupDiagnosticsLAMPSalmonellaSerovar

Identifiers

PMID36810725
PMCPMC9998568

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.