Evidence map›Paper›PMID 36809881›Full record

ArticlePlant communications2023

Genomic analysis, trajectory tracking, and field surveys reveal sources and long-distance dispersal routes of wheat stripe rust pathogen in China.

Yuxiang Li, Jichen Dai, Taixue Zhang, Baotong Wang, Siyue Zhang, Conghao Wang, Jiguang Zhang, Qiang Yao, Mingju Li, Chengyun Li and 17 more

Open access · goldAbstract read
In one paragraph

Article in Plant communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
13.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 34 citations in OpenAlex.

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  11. Aggressiveness ofPlants (Basel, Switzerland) · 2024
    Article
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  13. Genome-wide atlas of rust resistance loci in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 13 institutions in 4 countries.

Yuxiang LiState Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Taicheng Road 3, Yangling, Shaanxi, China.
Jichen DaiState Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Taicheng Road 3, Yangling, Shaanxi, China.
Taixue ZhangState Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Taicheng Road 3, Yangling, Shaanxi, China.
Baotong WangState Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Taicheng Road 3, Yangling, Shaanxi, China.
Siyue ZhangState Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Taicheng Road 3, Yangling, Shaanxi, China.
Conghao WangState Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Taicheng Road 3, Yangling, Shaanxi, China.
Jiguang ZhangState Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Taicheng Road 3, Yangling, Shaanxi, China.
Qiang YaoKey Laboratory of Agricultural Integrated Pest Management, Qinghai Province, Academy of Agriculture and Forestry Science, Qinghai University, Xining, Qinghai, China.
Mingju LiYunnan Key Laboratory of Green Prevention and Control of Agricultural Transboundary Pests, Agricultural Environment and Resource Institute, Yunnan Academy of Agricultural Sciences, Kunming, Yunnan, China.
Chengyun LiState Key Laboratory for Conservation and Utilization of Bio-resources in Yunnan, Yunnan Agricultural University, Kunming, Yunnan, China.
Yuelin PengDepartment of Plant Pathology, Tibet Agricultural and Animal Husbandry College, Linzhi, Tibet, China.
Shiqin CaoWheat Research Institute, Gansu Academy of Agricultural Sciences, Lanzhou, Gansu, China.
Gangming ZhanState Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Taicheng Road 3, Yangling, Shaanxi, China.
Fei TaoBiocontrol Engineering Laboratory of Crop Diseases and Pests of Gansu Province, College of Plant Protection, Gansu Agricultural University, Lanzhou, Gansu, China.
Haifeng GaoInstitute of Plant Protection, Xinjiang Academy of Agricultural Sciences, Urumqi, Xinjiang, China.
Weili HuangXi'an Huang's Bio-technology Company Ltd, Xi'an, Shaanxi, China.
Xiaojun FengShaanxi Plant Protection Extension Station, Xi'an, Shaanxi, China.
Yingwen BaiBaoji Plant Protection Extension Station, Baoji, Shaanxi, China.
Zhuoma QucuoDepartment of Plant Pathology, Tibet Agricultural and Animal Husbandry College, Linzhi, Tibet, China.
Hongsheng ShangState Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Taicheng Road 3, Yangling, Shaanxi, China.
Chong HuangNational Agricultural Technology Extension and Service Center, Ministry of Agriculture, Beijing, China.
Wancai LiuNational Agricultural Technology Extension and Service Center, Ministry of Agriculture, Beijing, China.
Jiasui ZhanDepartment of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Xiangming XuPest & Pathogen Ecology, NIAB EMR, East Malling, West Malling, Kent, UK.
Xianming ChenAgricultural Research Service, United States Department of Agriculture and Department of Plant Pathology, Washington State University, Pullman, WA, USA.
Zhensheng KangState Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Taicheng Road 3, Yangling, Shaanxi, China. Electronic address: kangzs@nwsuaf.edu.cn.
Xiaoping HuState Key Laboratory of Crop Stress Biology for Arid Areas and College of Plant Protection, Northwest A&F University, Taicheng Road 3, Yangling, Shaanxi, China. Electronic address: xphu@nwsuaf.edu.cn.
Northwest A&F University · CNTibet University · CNNational Engineering Research Center for Information Technology in Agriculture · CNYunnan Agricultural University · CNEast Malling Research (United Kingdom) · GBGansu Academy of Agricultural Sciences · CNGansu Agricultural University · CNInstitute of Plant Protection · CNNorth West Agriculture and Forestry University · CNQinghai University · CNSwedish University of Agricultural Sciences · SEXi'an Botanical Garden of Shaanxi Province · CNYunnan Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Identifying sources of phytopathogen inoculum and determining their contributions to disease outbreaks are essential for predicting disease development and establishing control strategies. Puccinia striiformis f. sp. tritici (Pst), the causal agent of wheat stripe rust, is an airborne fungal pathogen with rapid virulence variation that threatens wheat production through its long-distance migration. Because of wide variation in geographic features, climatic conditions, and wheat production systems, Pst sources and related dispersal routes in China are largely unclear. In the present study, we performed genomic analyses of 154 Pst isolates from all major wheat-growing regions in China to determine Pst population structure and diversity. Through trajectory tracking, historical migration studies, genetic introgression analyses, and field surveys, we investigated Pst sources and their contributions to wheat stripe rust epidemics. We identified Longnan, the Himalayan region, and the Guizhou Plateau, which contain the highest population genetic diversities, as the Pst sources in China. Pst from Longnan disseminates mainly to eastern Liupan Mountain, the Sichuan Basin, and eastern Qinghai; that from the Himalayan region spreads mainly to the Sichuan Basin and eastern Qinghai; and that from the Guizhou Plateau migrates mainly to the Sichuan Basin and the Central Plain. These findings improve our current understanding of wheat stripe rust epidemics in China and emphasize the need for managing stripe rust on a national scale.

Indexed as

GenomicsTriticumChinadisease epidemicsgenome sequencingpopulation geneticsPuccinia striiformis f. sp. triticistripe rust

Identifiers

PMID36809881
PMCPMC10363508
OpenAlexW4321456284

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.