Evidence map›Paper›PMID 36809072›Full record

ArticleApplied and environmental microbiology2023

Viral and Bacterial Communities Collaborate through Complementary Assembly Processes in Soil to Survive Organochlorine Contamination.

Shujian Yuan, Ville-Petri Friman, Jose Luis Balcazar, Xiaoxuan Zheng, Mao Ye, Mingming Sun, Feng Hu

Open access · hybridAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
5.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
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  8. Adaptive expression of phage auxiliary metabolic genes in paddy soils and their contribution toward global carbon sequestration.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 4 countries.

Shujian YuanSoil Ecology Lab, Key Laboratory of Plant Community, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization & Jiangsu Key Laboratory for Solid Organic Waste Utilization, Nanjing, China.
Ville-Petri FrimanDepartment of Biology, University of York, York, United Kingdom.ORCID 0000-0002-1592-157X
Jose Luis BalcazarCatalan Institute for Water Research (ICRA), Girona, Spain.ORCID 0000-0002-6866-9347
Xiaoxuan ZhengSoil Ecology Lab, Key Laboratory of Plant Community, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization & Jiangsu Key Laboratory for Solid Organic Waste Utilization, Nanjing, China.
Mao YeKey Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, China.
Mingming SunSoil Ecology Lab, Key Laboratory of Plant Community, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization & Jiangsu Key Laboratory for Solid Organic Waste Utilization, Nanjing, China.ORCID 0000-0002-5550-6813
Feng HuSoil Ecology Lab, Key Laboratory of Plant Community, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization & Jiangsu Key Laboratory for Solid Organic Waste Utilization, Nanjing, China.
The Synergetic Innovation Center for Advanced Materials · CNChinese Academy of Sciences · CNUniversitat de Girona · ESUniversity of Helsinki · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ecological drivers that direct the assembly of viral and host bacterial communities are largely unknown, even though viral-encoded accessory genes help host bacteria survive in polluted environments. To understand the ecological mechanism(s) of viruses and hosts synergistically surviving under organochlorine pesticide (OCP) stress, we investigated the community assembly processes of viruses and bacteria at the taxon and functional gene levels in clean and OCP-contaminated soils in China using a combination of metagenomics/viromics and bioinformatics approaches. We observed a decreased richness of bacterial taxa and functional genes but an increased richness of viral taxa and auxiliary metabolic genes (AMGs) in OCP-contaminated soils (from 0 to 2,617.6 mg · kg

Indexed as

Hydrocarbons, ChlorinatedMicrobiotaPesticidesVirusesBacteriaSoilSoil MicrobiologyHydrocarbons, ChlorinatedPesticidesSoilmicrobial community assemblyorganochlorine pesticidessoilvirusvirus-host interactions

Identifiers

PMID36809072
PMCPMC10056961
OpenAlexW4321446950

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.