Evidence map›Paper›PMID 36808541›Full record

ArticleThe Plant cell2023

The transcriptional landscape of plant infection by the rice blast fungus Magnaporthe oryzae reveals distinct families of temporally co-regulated and structurally conserved effectors.

Xia Yan, Bozeng Tang, Lauren S Ryder, Dan MacLean, Vincent M Were, Alice Bisola Eseola, Neftaly Cruz-Mireles, Weibin Ma, Andrew J Foster, Miriam Osés-Ruiz and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed, 1 pooled it
63.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 1 synthesis or guideline pooled it, 128 citations in OpenAlex.

  1. Pooled it
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  12. Yeast as a Platform to Dissect Poly(ADP-Ribose) Polymerase Function fromInternational journal of molecular sciences · 2026
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  17. Optimized Combinations of Filtrates ofJournal of fungi (Basel, Switzerland) · 2025
    Article
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5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Xia YanThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0003-4509-0137
Bozeng TangThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0002-3986-9622
Lauren S RyderThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0002-3191-5495
Dan MacLeanThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0003-1032-0887
Vincent M WereThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0002-9885-4877
Alice Bisola EseolaThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0001-5698-8204
Neftaly Cruz-MirelesThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0003-1031-1470
Weibin MaThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0002-0516-2151
Andrew J FosterThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0002-8459-7590
Miriam Osés-RuizThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0002-3989-9071
Nicholas J TalbotThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0001-6434-7757
University of East Anglia · GB

Funding

Biotechnology and Biological Sciences Research Council BBS/E/J/000PR9797Biotechnology and Biological Sciences Research Council BB/V016342/1
6 · The paper itself

Abstract

The rice blast fungus Magnaporthe oryzae causes a devastating disease that threatens global rice (Oryza sativa) production. Despite intense study, the biology of plant tissue invasion during blast disease remains poorly understood. Here we report a high-resolution transcriptional profiling study of the entire plant-associated development of the blast fungus. Our analysis revealed major temporal changes in fungal gene expression during plant infection. Pathogen gene expression could be classified into 10 modules of temporally co-expressed genes, providing evidence for the induction of pronounced shifts in primary and secondary metabolism, cell signaling, and transcriptional regulation. A set of 863 genes encoding secreted proteins are differentially expressed at specific stages of infection, and 546 genes named MEP (Magnaportheeffector protein) genes were predicted to encode effectors. Computational prediction of structurally related MEPs, including the MAX effector family, revealed their temporal co-regulation in the same co-expression modules. We characterized 32 MEP genes and demonstrate that Mep effectors are predominantly targeted to the cytoplasm of rice cells via the biotrophic interfacial complex and use a common unconventional secretory pathway. Taken together, our study reveals major changes in gene expression associated with blast disease and identifies a diverse repertoire of effectors critical for successful infection.

Indexed as

AscomycotaMagnaportheOryzaCytoplasmFungal ProteinsPlant DiseasesSignal TransductionFungal Proteins

Identifiers

PMID36808541
PMCPMC10118281
OpenAlexW4321331851

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.