Evidence map›Paper›PMID 36807796›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2023

Functional Assessment of Mitochondrial DNA Maintenance by Depletion and Repopulation Using 2',3'-Dideoxycytidine in Cultured Cells.

Gábor Zsurka, Genevieve Trombly, Susanne Schöler, Daniel Blei, Wolfram S Kunz

Abstract read
PubMed Publisher
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Gábor ZsurkaDivision of Neurochemistry, Institute of Experimental Epileptology and Cognition Research, University of Bonn, Bonn, Germany.
Genevieve TromblyDivision of Neurochemistry, Institute of Experimental Epileptology and Cognition Research, University of Bonn, Bonn, Germany.
Susanne SchölerDepartment of Epileptology, University of Bonn, Bonn, Germany.
Daniel BleiDivision of Neurochemistry, Institute of Experimental Epileptology and Cognition Research, University of Bonn, Bonn, Germany.
Wolfram S KunzDivision of Neurochemistry, Institute of Experimental Epileptology and Cognition Research, University of Bonn, Bonn, Germany. wolfram.kunz@ukbonn.de.
University of Bonn · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The manipulation of mitochondrial DNA (mtDNA) copy number in cultured cells, using substances that interfere with DNA replication, is a useful tool to investigate various aspects of mtDNA maintenance. Here we describe the use of 2',3'-dideoxycytidine (ddC) to induce a reversible reduction of mtDNA copy number in human primary fibroblasts and human embryonic kidney (HEK293) cells. Once the application of ddC is stopped, cells depleted for mtDNA attempt to recover normal mtDNA copy numbers. The dynamics of repopulation of mtDNA provide a valuable measure for the enzymatic activity of the mtDNA replication machinery.

Indexed as

DNA, MitochondrialZalcitabineCells, CulturedDNA ReplicationHEK293 CellsHumansMitochondriaDNA, MitochondrialZalcitabineDNA polymerase γ (POLG)mtDNA copy numberNucleoside reverse transcriptase inhibitor (NRTI)Quantitative PCRReplication of mtDNAZalcitabine

Identifiers

PMID36807796
OpenAlexW4321478365

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.