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ArticleCurrent microbiology2023

Bacterial Communities and Diversity of Western Ghats Soil: A Study of a Biodiversity Hotspot.

Uma Ghare, Simran Narvekar, Tushar Lodha, Rubiya Mallebhari, Syed Dastager, Vitthal T Barvkar, Dhiraj Dhotre, Nitin R Karmalkar, Anupama A Pable

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Article in Current microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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3 · Its place in the literature

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2 citing papers in PubMed.

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5 · Who and what money

Authors and funding

9 authors.

Uma Ghare *Department of Microbiology, Savitribai Phule Pune University, Ganeshkhind, Pune, 411007, India.
Simran Narvekar *National Centre for Microbial Resource, National Centre for Cell Science, Pune, India.
Tushar LodhaNational Centre for Microbial Resource, National Centre for Cell Science, Pune, India.
Rubiya MallebhariDepartment of Microbiology, Savitribai Phule Pune University, Ganeshkhind, Pune, 411007, India.
Syed DastagerNational Collection of Industrial Microorganisms (NCIM), National Chemical Laboratory, Pune, India.
Vitthal T BarvkarDepartment of Botany, Savitribai Phule Pune University, Ganeshkhind, Pune, India.
Dhiraj DhotreNational Centre for Cell Science, Pune, India.
Nitin R KarmalkarSavitribai Phule Pune University, Ganeshkhind, Pune, India.
Anupama A PableDepartment of Microbiology, Savitribai Phule Pune University, Ganeshkhind, Pune, 411007, India. anupamapable@unipune.ac.in.ORCID http://orcid.org/0000-0002-1465-5994

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Western Ghats is one of India's mega-diversity hotspots and an ecologically and geologically important area for the diversity of endemic plants and animals. The present study provides insights into the aerobic bacterial diversity and composition of the soils of North Western Ghats located in Maharashtra state (NWGM), India. The samples for the culture-dependent study were collected from 6 different locations namely Malshej Ghat, Bhimashankar, Lonavala, Mulshi, Tail-Baila, and Mahabaleshwar. A total of 173 isolates were obtained from the different samples, which belonged to Proteobacteria (43%), Firmicutes (36%), and Actinobacteria (19%). Sequences of 15 strains shared ≤ 98.7% similarity (a species cut-off) which represent potential novel species. Metagenomic analysis revealed the presence of Actinobacteria and Proteobacteria as the most dominant phyla at both MB and MG. However, both sites showed variation in the composition of rare phyla and other dominant phyla. This difference in bacterial community composition could be due to differences in altitude or other physicochemical properties. The functional prediction from the amplicon sequencing showed the abundance of carbohydrate, protein, and lipid metabolism which was corroborated by screening the isolated bacterial strains for the same. The present study has a unique take on microbial diversity and defines the importance of community assembly processes such as drift, dispersal, and selection. Such processes are relatively important in controlling community diversity, distribution, as well as succession. This study has shown that the microbial community of NWGM is a rich source of polysaccharide degrading bacteria having biotechnological potential.

Indexed as

ActinobacteriaSoilAnimalsBacteriaBiodiversityIndiaProteobacteriaRNA, Ribosomal, 16SSoil MicrobiologyRNA, Ribosomal, 16SSoil

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