Evidence map›Paper›PMID 36804390›Full record

ArticleThe Journal of allergy and clinical immunology2023

The Hdc GC box is critical for Hdc gene transcription and histamine-mediated anaphylaxis.

Yapeng Li, Junfeng Gao, Dianzheng Zhao, Xiaoyu Guan, Suzanne C Morris, Fred D Finkelman, Hua Huang

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of allergy and clinical immunology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Plants (Basel, Switzerland) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Yapeng LiDepartment of Immunology and Genomic Medicine, National Jewish Health, Denver, Colo.
Junfeng GaoDepartment of Immunology and Genomic Medicine, National Jewish Health, Denver, Colo.
Dianzheng ZhaoDepartment of Immunology and Genomic Medicine, National Jewish Health, Denver, Colo.
Xiaoyu GuanDepartment of Immunology and Genomic Medicine, National Jewish Health, Denver, Colo.
Suzanne C MorrisDepartment of Medicine, Division of Immunology, Allergy, and Rheumatology, University of Cincinnati College of Medicine, Cincinnati, Ohio.
Fred D FinkelmanDepartment of Medicine, Division of Immunology, Allergy, and Rheumatology, University of Cincinnati College of Medicine, Cincinnati, Ohio; Division of Immunobiology, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio.
Hua HuangDepartment of Immunology and Genomic Medicine, National Jewish Health, Denver, Colo; Department of Immunology and Microbiology, University of Colorado Anschutz Medical Campus, Aurora, Colo. Electronic address: huangh@njhealth.org.
National Jewish Health · USCincinnati Children's Hospital Medical Center · USUniversity of Cincinnati Medical Center · US

Funding

Regulation of Gene Expression in the anaphylactic PathwayR01AI135194 · NIAID · NATIONAL JEWISH HEALTH · PI HUANG, HUA · 2018 to 2022
$3.1M
Rapid, safe suppression of IgE-mediated disease with monovalent anti-ceRIa mAbR01AI145991 · NIAID · UNIVERSITY OF CINCINNATI · PI FINKELMAN, FRED DOUGLASS, KHODOUN, MARAT · 2019 to 2023
$2.6M
Innate Effectors and Type-2 InflammationR01AI107022 · NIAID · NATIONAL JEWISH HEALTH · PI HUANG, HUA · 2016 to 2020
$2.0M
Gene Responses in Basophil-Mediated Allergic ResponsesR01AI083986 · NIAID · NATIONAL JEWISH HEALTH · PI HUANG, HUA · 2010 to 2014
$1.9M
NIAID NIH HHS R01 AI083986NIAID NIH HHS R01 AI107022NIAID NIH HHS R01 AI135194NIAID NIH HHS R01 AI145991
6 · The paper itself

Abstract

backgroundHistamine is a critical mediator of anaphylaxis, a neurotransmitter, and a regulator of gastric acid secretion. Histidine decarboxylase is a rate-limiting enzyme for histamine synthesis. However, in vivo regulation of Hdc, the gene that encodes histidine decarboxylase, is poorly understood.

objectiveWe sought to investigate how enhancers regulate Hdc gene transcription and histamine synthesis in resting conditions and in a mouse model of anaphylaxis.

methodsH3K27 acetylation histone modification and chromatin accessibility were used to identify candidate enhancers. The enhancer activity of candidate enhancers was measured in a reporter gene assay, and the function enhancers were validated by CRISPR deletion.

resultsDeletion of the GC box, which binds to zinc finger transcription factors, in the proximal Hdc enhancer reduced Hdc gene transcription and histamine synthesis in mouse and human mast cell lines. Mast cells, basophils, brain cells, and stomach cells from GC box-deficient mice transcribed the Hdc gene much less than similar cells from wild-type mice, and Hdc GC box-deficient mice failed to develop anaphylaxis.

conclusionThe HDC GC box within the proximal enhancer in the mouse and human HDC gene is essential for Hdc gene transcription, histamine synthesis, and histamine-mediated anaphylaxis in vitro and in vivo.

Indexed as

AnaphylaxisHistidine DecarboxylaseAnimalsCell LineHistamineHumansMiceTranscription, GeneticHistamineHistidine DecarboxylaseanaphylaxisGC boxHdc gene enhancersHistamine

Identifiers

PMID36804390
PMCPMC10330076
OpenAlexW4321189484

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.