Evidence map›Paper›PMID 36802786›Full record

ArticlePhilosophical transactions of the Royal Society of London. Series B, Biological sciences2023

A study of transfer of information in animal collectives using deep learning tools.

Francisco Romero-Ferrero, Francisco J H Heras, Dean Rance, Gonzalo G de Polavieja

Abstract read
In one paragraph

Article in Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Selective social interactions and speed-induced leadership in schooling fish.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  3. A multi-scale review of the dynamics of collective behaviour: from rapid responses to ontogeny and evolution.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Francisco Romero-FerreroChampalimaud Research, Champalimaud Foundation, 1400-038 Lisbon, Portugal.ORCID 0000-0002-4353-7997
Francisco J H HerasChampalimaud Research, Champalimaud Foundation, 1400-038 Lisbon, Portugal.ORCID 0000-0001-8124-2359
Dean RanceChampalimaud Research, Champalimaud Foundation, 1400-038 Lisbon, Portugal.ORCID 0000-0002-7046-3778
Gonzalo G de PolaviejaChampalimaud Research, Champalimaud Foundation, 1400-038 Lisbon, Portugal.ORCID 0000-0001-5359-3426

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We studied how the interactions among animals in a collective allow for the transfer of information. We performed laboratory experiments to study how zebrafish in a collective follow a subset of trained animals that move towards a light when it turns on because they expect food at that location. We built some deep learning tools to distinguish from video which are the trained and the naïve animals and to detect when each animal reacts to the light turning on. These tools gave us the data to build a model of interactions that we designed to have a balance between transparency and accuracy. The model finds a low-dimensional function that describes how a naïve animal weights neighbours depending on focal and neighbour variables. According to this low-dimensional function, neighbour speed plays an important role in the interactions. Specifically, a naïve animal weights more a neighbour in front than to the sides or behind, and more so the faster the neighbour is moving; and if the neighbour moves fast enough, the differences coming from the neighbour's relative position largely disappear. From the lens of decision-making, neighbour speed acts as confidence measure about where to go. This article is part of a discussion meeting issue 'Collective behaviour through time'.

Indexed as

Deep LearningZebrafishAnimalsBehavior, Animalcollective behaviourdeep learningmathematical modelsoftware toolszebrafish

Identifiers

PMID36802786
PMCPMC9939271

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.