Evidence map›Paper›PMID 36802573›Full record

ArticleJournal of the American Chemical Society2023

Oxidative Dearomatization of PLP in Thiamin Pyrimidine Biosynthesis in

Anushree Mondal, Rung-Yi Lai, Dmytro Fedoseyenko, Nitai Giri, Tadhg P Begley

Open access · hybridAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Characterization of anBiochemistry · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Anushree MondalDepartment of Chemistry, Texas A&M University, College Station, Texas77843, United States.ORCID 0000-0001-8275-0582
Rung-Yi LaiDepartment of Chemistry, Texas A&M University, College Station, Texas77843, United States.ORCID 0000-0002-2076-0969
Dmytro FedoseyenkoDepartment of Chemistry, Texas A&M University, College Station, Texas77843, United States.
Nitai GiriDepartment of Chemistry, Texas A&M University, College Station, Texas77843, United States.ORCID 0000-0002-0476-840X
Tadhg P BegleyDepartment of Chemistry, Texas A&M University, College Station, Texas77843, United States.ORCID 0000-0001-5134-2623
Texas A&M University · US

Funding

The mechanistic enzymology of thiamin biosynthesisR37DK044083 · NIDDK · TEXAS A&M UNIVERSITY · PI BEGLEY, TADHG P. · 2008 to 2017
$3.7M
The mechanistic enzymology of thiamin biosynthesisR01DK044083 · NIDDK · CORNELL UNIVERSITY ITHACA · PI BEGLEY, TADHG P. · 1991 to 2007
$2.5M
The mechanistic enzymology of thiamin biosynthesisR56DK044083 · NIDDK · TEXAS A&M UNIVERSITY · PI BEGLEY, TADHG P. · 2019 to 2019
$150k
NIDDK NIH HHS R01 DK044083NIDDK NIH HHS R37 DK044083NIDDK NIH HHS R56 DK044083
6 · The paper itself

Abstract

The yeast thiamin pyrimidine synthase THI5p catalyzes one of the most complex organic rearrangements found in primary metabolism. In this reaction, the active site His66 and PLP are converted to thiamin pyrimidine in the presence of Fe(II) and oxygen. The enzyme is a single-turnover enzyme. Here, we report the identification of an oxidatively dearomatized PLP intermediate. We utilize oxygen labeling studies, chemical-rescue-based partial reconstitution experiments, and chemical model studies to support this identification. In addition, we also identify and characterize three shunt products derived from the oxidatively dearomatized PLP.

Indexed as

Candida albicansPyrimidinesOxidative StressOxygenThiamineOxygenPyrimidinesThiamine

Identifiers

PMID36802573
PMCPMC10848271
OpenAlexW4321366903

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.