Evidence map›Paper›PMID 36802428›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

Terpene biosynthesis in marine sponge animals.

Kayla Wilson, Tristan de Rond, Immo Burkhardt, Taylor S Steele, Rebecca J B Schäfer, Sheila Podell, Eric E Allen, Bradley S Moore

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
11.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 42 citations in OpenAlex.

  1. Investigations of the Evolved Molecular Basis for Terpenoid Biosynthesis in Marine Sponges.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
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  6. Review
  7. Diversification of diterpene biosynthesis occurred early in octocoral evolution.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Article
  9. Article
  10. Biosynthesis of the Red Algal Diterpene Peyssonnosol in Bacteria.Angewandte Chemie (International ed. in English) · 2025
    Article
  11. Jaspamide/Jasplakinolide Is Synthesized byJournal of natural products · 2025
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Short macrocyclic peptides in sponge genomes.Proceedings of the National Academy of Sciences of the United States of America · 2024
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  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 2 countries.

Kayla WilsonScripps Institution of Oceanography, University of California, San Diego, La Jolla, CA 92093.ORCID 0000-0003-0815-8411
Tristan de RondScripps Institution of Oceanography, University of California, San Diego, La Jolla, CA 92093.ORCID 0000-0002-5203-4662
Immo BurkhardtScripps Institution of Oceanography, University of California, San Diego, La Jolla, CA 92093.ORCID 0000-0001-9515-4042
Taylor S SteeleScripps Institution of Oceanography, University of California, San Diego, La Jolla, CA 92093.ORCID 0000-0003-3231-0639
Rebecca J B SchäferScripps Institution of Oceanography, University of California, San Diego, La Jolla, CA 92093.
Sheila PodellScripps Institution of Oceanography, University of California, San Diego, La Jolla, CA 92093.ORCID 0000-0001-7073-5190
Eric E AllenScripps Institution of Oceanography, University of California, San Diego, La Jolla, CA 92093.
Bradley S MooreScripps Institution of Oceanography, University of California, San Diego, La Jolla, CA 92093.ORCID 0000-0002-4652-1253
Scripps Institution of Oceanography · US

Funding

Natural Product Genome MiningR01GM085770 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JENSEN, PAUL R, MOORE, BRADLEY S · 2009 to 2024
$5.8M
Natural Sources and Microbial Transformation of Marine Halogenated PollutantsR01ES030316 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ALLEN, ERIC ELLSWORTH, MOORE, BRADLEY S · 2018 to 2022
$669k
Elucidating the genetic basis of imidazopyrazinone luciferin biosynthesis for the development of improved bioluminescence imaging technologiesF32GM129960 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DE ROND, TRISTAN · 2018 to 2020
$185k
NIEHS NIH HHS R01 ES030316NIGMS NIH HHS F32 GM129960NIGMS NIH HHS R01 GM085770
6 · The paper itself

Abstract

Sea sponges are the largest marine source of small-molecule natural products described to date. Sponge-derived molecules, such as the chemotherapeutic eribulin, the calcium-channel blocker manoalide, and antimalarial compound kalihinol A, are renowned for their impressive medicinal, chemical, and biological properties. Sponges contain microbiomes that control the production of many natural products isolated from these marine invertebrates. In fact, all genomic studies to date investigating the metabolic origins of sponge-derived small molecules concluded that microbes-not the sponge animal host-are the biosynthetic producers. However, early cell-sorting studies suggested the sponge animal host may play a role particularly in the production of terpenoid molecules. To investigate the genetic underpinnings of sponge terpenoid biosynthesis, we sequenced the metagenome and transcriptome of an isonitrile sesquiterpenoid-containing sponge of the order Bubarida. Using bioinformatic searches and biochemical validation, we identified a group of type I terpene synthases (TSs) from this sponge and multiple other species, the first of this enzyme class characterized from the sponge holobiome. The Bubarida TS-associated contigs consist of intron-containing genes homologous to sponge genes and feature GC percentage and coverage consistent with other eukaryotic sequences. We identified and characterized TS homologs from five different sponge species isolated from geographically distant locations, thereby suggesting a broad distribution amongst sponges. This work sheds light on the role of sponges in secondary metabolite production and speaks to the possibility that other sponge-specific molecules originate from the animal host.

Indexed as

Biological ProductsMicrobiotaPoriferaAnimalsAquatic OrganismsMetagenomePhylogenyBiological Productsbiosynthesismarine spongenatural productsterpene synthase

Identifiers

PMID36802428
PMCPMC9992776
OpenAlexW4321440619

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.