Evidence map›Paper›PMID 36800214›Full record

ArticleeLife2023

Tracking multiple conformations occurring on angstrom-and-millisecond scales in single amino-acid-transporter molecules.

Yufeng Zhou, John H Lewis, Zhe Lu

Open access · goldAbstract read
In one paragraph

Article in eLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Other Techniques.Advances in biochemical engineering/biotechnology · 2026
    Review
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Yufeng ZhouDepartment of Physiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, United States.
John H LewisDepartment of Physiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, United States.
Zhe LuDepartment of Physiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, United States.ORCID https://orcid.org/0000-0001-7108-9303
University of Pennsylvania · US

Funding

Kinetic mechanisms of amino acid transportersR01DK125521 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI LU, ZHE · 2020 to 2023
$1.6M
NIDDK NIH HHS R01 DK125521
6 · The paper itself

Abstract

Most membrane protein molecules undergo conformational changes as they transition from one functional state to another one. An understanding of the mechanism underlying these changes requires the ability to resolve individual conformational states, whose changes often occur on millisecond and angstrom scales. Tracking such changes and acquiring a sufficiently large amount of data remain challenging. Here, we use the amino-acid transporter AdiC as an example to demonstrate the application of a high-resolution fluorescence-polarization-microscopy method in tracking multistate conformational changes of a membrane protein. We have successfully resolved four conformations of AdiC by monitoring the emission-polarization changes of a fluorophore label and quantified their probabilities in the presence of a series of concentrations of its substrate arginine. The acquired data are sufficient for determining all equilibrium constants that fully establish the energetic relations among the four states. The

Indexed as

Amino Acid Transport SystemsArginineMolecular ConformationAmino Acid Transport SystemsArginineE. colienergetic mechanismfluorescence polarizationneurosciencesingle-molecule fluorescence microscopytransporter

Identifiers

PMID36800214
PMCPMC9937647
OpenAlexW4321165675

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.