Evidence map›Paper›PMID 36799874›Full record

ArticleInvestigative ophthalmology & visual science2023

Genetic Manipulation of Corynebacterium mastitidis to Better Understand the Ocular Microbiome.

Yannis Rigas, Benjamin R Treat, Jackie Shane, Robert M Q Shanks, Anthony J St Leger

Open access · goldAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
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  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Yannis RigasDepartment of Ophthalmology, University of Pittsburgh, Pittsburgh Pennsylvania, United States.
Benjamin R TreatDepartment of Ophthalmology, University of Pittsburgh, Pittsburgh Pennsylvania, United States.
Jackie ShaneDepartment of Ophthalmology, University of Pittsburgh, Pittsburgh Pennsylvania, United States.
Robert M Q ShanksDepartment of Ophthalmology, University of Pittsburgh, Pittsburgh Pennsylvania, United States.
Anthony J St LegerDepartment of Ophthalmology, University of Pittsburgh, Pittsburgh Pennsylvania, United States.
University of Pittsburgh · US

Funding

Virus Production and Manipulation of Protein/Gene Expression ModuleP30EY008098 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Ethan A Rossi · 1989 to 2026
$17.8M
Contribution of Sympathetic Nerves to Herpes Stromal KeratitisR01EY026891 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ANTHONY J ST LEGER · 2017 to 2026
$4.7M
Understanding the microbial requirements for colonization and immunogenicity of commensal bacteria at the ocular surfaceR01EY032482 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ST LEGER, ANTHONY J · 2021 to 2025
$2.0M
NEI NIH HHS P30 EY008098NEI NIH HHS R01 EY026891NEI NIH HHS R01 EY032482
6 · The paper itself

Abstract

Purpose: Corynebacterium spp. are Gram-positive bacteria commonly associated with the ocular surface. Corynebacterium mastitidis was isolated from mouse eyes and was demonstrated to induce a beneficial immune response that can protect the eye from pathogenic infection. Because eye-relevant Corynebacterium spp. are not well described, we generated a C. mast transposon (Tn) mutant library to gain a better understanding of the nature of eye-colonizing bacteria. Methods: Tn mutagenesis was performed with a custom Tn5-based transposon that incorporated a promoterless gene for the fluorescent protein mCherry. We screened our library using flow cytometry and enzymatic assays to identify useful mutants that demonstrate the utility of our approach. Results: Fluorescence-activated cell sorting (FACS) of mCherry+ bacteria allowed us to identify a highly fluorescent mutant that was detectable on the murine ocular surface using microscopy. We also identified a functional knockout that was unable to hydrolyze urea, UreaseKO. Although uric acid is an antimicrobial factor produced in tears, UreaseKO bacterium maintained an ability to colonize the eye, suggesting that urea hydrolysis is not required for colonization. In vitro and in vivo, both mutants maintained the potential to stimulate protective immunity as compared to wild-type C. mast. Conclusions: In sum, we describe a method to genetically modify an eye-colonizing microbe, C. mast. Furthermore, the procedures outlined here will allow for the continued development of genetic tools for modifying ocular Corynebacterium spp., which will lead to a more complete understanding of the interactions between the microbiome and host immunity at the ocular surface.

Indexed as

EyeMicrobiotaAnimalsCorynebacteriumMiceVision, Ocular

Identifiers

PMID36799874
PMCPMC9942783
OpenAlexW4321168801

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.