Evidence map›Paper›PMID 36799304›Full record

ArticleeLife2023

The multi-tissue landscape of somatic mtDNA mutations indicates tissue-specific accumulation and removal in aging.

Monica Sanchez-Contreras, Mariya T Sweetwyne, Kristine A Tsantilas, Jeremy A Whitson, Matthew D Campbell, Brenden F Kohrn, Hyeon Jeong Kim, Michael J Hipp, Jeanne Fredrickson, Megan M Nguyen and 4 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
9.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
  2. Article
  3. Mitochondrial molecular diversity in the brain.Current opinion in neurobiology · 2026
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Monica Sanchez-Contreras *Department of Laboratory Medicine and Pathology, University of Washington, Seattle, United States.ORCID 0000-0002-3092-2781
Mariya T Sweetwyne *Department of Laboratory Medicine and Pathology, University of Washington, Seattle, United States.
Kristine A TsantilasDepartment of Biochemistry, University of Washington, Seattle, United States.ORCID 0000-0002-4274-6930
Jeremy A WhitsonDepartment of Laboratory Medicine and Pathology, University of Washington, Seattle, United States.
Matthew D CampbellDepartment of Radiology, University of Washington, Seattle, United States.
Brenden F KohrnDepartment of Laboratory Medicine and Pathology, University of Washington, Seattle, United States.ORCID 0000-0001-9948-2131
Hyeon Jeong KimDepartment of Biology, University of Washington, Seattle, United States.
Michael J HippDepartment of Laboratory Medicine and Pathology, University of Washington, Seattle, United States.ORCID 0000-0003-1904-0670
Jeanne FredricksonDepartment of Laboratory Medicine and Pathology, University of Washington, Seattle, United States.
Megan M NguyenDepartment of Laboratory Medicine and Pathology, University of Washington, Seattle, United States.
James B HurleyDepartment of Biochemistry, University of Washington, Seattle, United States.ORCID 0000-0002-7754-0705
David J MarcinekDepartment of Radiology, University of Washington, Seattle, United States.
Peter S RabinovitchDepartment of Laboratory Medicine and Pathology, University of Washington, Seattle, United States.ORCID 0000-0001-7169-3543
Scott R KennedyDepartment of Laboratory Medicine and Pathology, University of Washington, Seattle, United States.ORCID 0000-0002-4444-1145
University of Washington · US

Funding

PILOT STUDY--CLINICAL NUTRITION RESEARCHP30DK035816 · NIDDK · UNIVERSITY OF WASHINGTON · PI GREGORY J MORTON · 1986 to 2026
$30.4M
SPECIFICITY OF OXYGEN DNA DAMAGE AND MUTAGENESISP01AG001751 · NIA · UNIVERSITY OF WASHINGTON · PI PRUSKY, GLEN THOMAS · 1985 to 2021
$29.6M
GENETIC APPROACHES TO AGING RESEARCHT32AG000057 · NIA · UNIVERSITY OF WASHINGTON · PI RABINOVITCH, PETER S · 1985 to 2019
$14.2M
Targeted DNA Methylation and Mitochondrial Heteroplasmy CoreP30AG050911 · NIA · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI Matthew John Hart · 2015 to 2026
$13.9M
Biological Mechanisms of Healthy Aging Training GrantT32AG066574 · NIA · UNIVERSITY OF WASHINGTON · PI David J. Marcinek, Jessica E Young · 2020 to 2026
$5.3M
Massively Parallel Single Cell Detection of Rare Variants with Split-Pool Combinatorial IndexingR21HG011229 · NHGRI · UNIVERSITY OF WASHINGTON · PI KENNEDY, SCOTT ROBERT, SEELIG, GEORG · 2020 to 2020
$622k
Mitochondrial Protection to Derive Expanded Aged Renal Glomerular Progenitor CellsK01AG062757 · NIA · UNIVERSITY OF WASHINGTON · PI SWEETWYNE, MARIYA TS'ANA · 2019 to 2023
$619k
Mitochondrial DNA mutations in the renal cortex to elucidate cell-specific mechanisms of mitochondrial dysfunction in tubules and glomeruliR21DK128540 · NIDDK · UNIVERSITY OF WASHINGTON · PI SANCHEZ-CONTRERAS, MONICA YICETTE, SWEETWYNE, MARIYA TS'ANA · 2021 to 2023
$583k
Exploiting Urine Derived DNA for the Assessment of Bladder Cancer using High Accuracy SequencingR21CA259780 · NCI · UNIVERSITY OF WASHINGTON · PI KENNEDY, SCOTT ROBERT · 2021 to 2022
$395k
NCI NIH HHS R21 CA259780NHGRI NIH HHS R21 HG011229NIA NIH HHS K01 AG062757NIA NIH HHS K01AG062757NIA NIH HHS P01 AG001751NIA NIH HHS P30 AG050911NIA NIH HHS T32 AG000057NIA NIH HHS T32 AG066574NIA NIH HHS T32AG066574NIDDK NIH HHS P30 DK035816NIDDK NIH HHS R21 DK128540NIDDK NIH HHS R21DK128540
6 · The paper itself

Abstract

Accumulation of somatic mutations in the mitochondrial genome (mtDNA) has long been proposed as a possible mechanism of mitochondrial and tissue dysfunction that occurs during aging. A thorough characterization of age-associated mtDNA somatic mutations has been hampered by the limited ability to detect low-frequency mutations. Here, we used Duplex Sequencing on eight tissues of an aged mouse cohort to detect >89,000 independent somatic mtDNA mutations and show significant tissue-specific increases during aging across all tissues examined which did not correlate with mitochondrial content and tissue function. G→A/C→T substitutions, indicative of replication errors and/or cytidine deamination, were the predominant mutation type across all tissues and increased with age, whereas G→T/C→A substitutions, indicative of oxidative damage, were the second most common mutation type, but did not increase with age regardless of tissue. We also show that clonal expansions of mtDNA mutations with age is tissue- and mutation type-dependent. Unexpectedly, mutations associated with oxidative damage rarely formed clones in any tissue and were significantly reduced in the hearts and kidneys of aged mice treated at late age with elamipretide or nicotinamide mononucleotide. Thus, the lack of accumulation of oxidative damage-linked mutations with age suggests a life-long dynamic clearance of either the oxidative lesions or mtDNA genomes harboring oxidative damage.

Indexed as

AgingDNA, MitochondrialAnimalsMiceMitochondriaMutationOxidative StressDNA, Mitochondrialagingduplex sequencinggeneticsgenomicsmitochondrial DNAmousesomatic mutations

Identifiers

PMID36799304
PMCPMC10072880
OpenAlexW4321165882

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.