Evidence map›Paper›PMID 36797410›Full record

ArticleNature methods2023

Super-resolution SRS microscopy with A-PoD.

Hongje Jang, Yajuan Li, Anthony A Fung, Pegah Bagheri, Khang Hoang, Dorota Skowronska-Krawczyk, Xiaoping Chen, Jane Y Wu, Bogdan Bintu, Lingyan Shi

Open access · greenAbstract read
In one paragraph

Article in Nature methods, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
26.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 74 citations in OpenAlex.

  1. Review
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  13. Imaging Cellular Metabolic Rewiring with SuMMIT-SRS.bioRxiv : the preprint server for biology · 2025
    Article
  14. Review
  15. Article
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  17. Review
  18. Gentle Label-Free Nonlinear Optical Imaging Relaxes Linear-Absorption-Mediated Triplet.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  19. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Hongje JangShu Chien - Gene Lay Department of Bioengineering, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0003-3987-2538
Yajuan LiShu Chien - Gene Lay Department of Bioengineering, University of California San Diego, La Jolla, CA, USA.
Anthony A FungShu Chien - Gene Lay Department of Bioengineering, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0003-1631-7451
Pegah BagheriShu Chien - Gene Lay Department of Bioengineering, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0001-6853-6037
Khang HoangShu Chien - Gene Lay Department of Bioengineering, University of California San Diego, La Jolla, CA, USA.
Dorota Skowronska-KrawczykSchool of Medicine, University of California, Irvine, CA, USA.ORCID http://orcid.org/0000-0002-5758-4225
Xiaoping ChenThe Ken and Ruth Davee Department of Neurology, Northwestern University, Chicago, IL, USA.
Jane Y WuThe Ken and Ruth Davee Department of Neurology, Northwestern University, Chicago, IL, USA.
Bogdan BintuShu Chien - Gene Lay Department of Bioengineering, University of California San Diego, La Jolla, CA, USA.
Lingyan ShiShu Chien - Gene Lay Department of Bioengineering, University of California San Diego, La Jolla, CA, USA. lingyanshi@ucsd.edu.ORCID http://orcid.org/0000-0003-1373-3206
University of California San Diego · USNorthwestern University · USUniversity of California, Irvine · US

Funding

Training and Career Development CoreU54CA132378 · NCI · CITY COLLEGE OF NEW YORK · PI Tim Alan Ahles, ADRIANA ESPINOSA · 2008 to 2026
$28.9M
Training and Career Development and Education CoreU54CA137788 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI ADRIANA ESPINOSA, FRANCESCA M GANY · 2008 to 2026
$28.1M
The Human Lung BioMolecular Multi-Scale Atlas Program (HuBMAP-Lung)U54HL165443 · NHLBI · UNIVERSITY OF ROCHESTER · PI PRYHUBER, GLORIA S · 2022 to 2025
$8.0M
Kidney single cell and spatial molecular atlas project - KIDSSMAPU54DK134301 · NIDDK · WASHINGTON UNIVERSITY · PI ASHKAR, TAREK MAURICE, JAIN, SANJAY · 2022 to 2025
$7.8M
High-resolution High-speed Photoacoustic and Ultrasound Imaging of SmallVessel Functions in Ischemic StrokeR01NS111039 · NINDS · DUKE UNIVERSITY · PI YAO, JUNJIE · 2019 to 2023
$2.7M
Novel Optical Imaging Approach to Study Neurovascular Coupling SystemR21NS125395 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SHI, LINGYAN · 2022 to 2022
$435k
NCI NIH HHS U54 CA132378NCI NIH HHS U54 CA137788NHLBI NIH HHS U54 HL165443NIDDK NIH HHS U54 DK134301NINDS NIH HHS R01 NS111039NINDS NIH HHS R21 NS125395
6 · The paper itself

Abstract

Stimulated Raman scattering (SRS) offers the ability to image metabolic dynamics with high signal-to-noise ratio. However, its spatial resolution is limited by the numerical aperture of the imaging objective and the scattering cross-section of molecules. To achieve super-resolved SRS imaging, we developed a deconvolution algorithm, adaptive moment estimation (Adam) optimization-based pointillism deconvolution (A-PoD) and demonstrated a spatial resolution of lower than 59 nm on the membrane of a single lipid droplet (LD). We applied A-PoD to spatially correlated multiphoton fluorescence imaging and deuterium oxide (D

Indexed as

MicroscopySpectrum Analysis, RamanLipidsProteinsLipidsProteins

Identifiers

PMID36797410
PMCPMC10246886
OpenAlexW4321077169

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.