Evidence map›Paper›PMID 36797319›Full record

ArticleNature communications2023

Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus.

Anne Edwards, Isaac Njaci, Abhimanyu Sarkar, Zhouqian Jiang, Gemy George Kaithakottil, Christopher Moore, Jitender Cheema, Clare E M Stevenson, Martin Rejzek, Petr Novák and 20 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
13.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. WildPlants (Basel, Switzerland) · 2024
    Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Disruption of theInternational journal of molecular sciences · 2024
    Article
  11. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

30 authors at 8 institutions in 7 countries.

Anne EdwardsJohn Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK.ORCID http://orcid.org/0000-0002-3720-0968
Isaac NjaciJohn Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK.
Abhimanyu SarkarJohn Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK.ORCID http://orcid.org/0000-0002-4170-152X
Zhouqian JiangJohn Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK.ORCID http://orcid.org/0000-0002-8100-0322
Gemy George KaithakottilEarlham Institute, Norwich Research Park, Colney Lane, Norwich, NR4 7UZ, UK.ORCID http://orcid.org/0000-0003-1360-7808
Christopher MooreSchool of Life Sciences, University of Nottingham, University Park, Nottingham, NG7 2RD, UK.ORCID http://orcid.org/0000-0002-3122-7502
Jitender CheemaJohn Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK.
Clare E M StevensonJohn Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK.ORCID http://orcid.org/0000-0001-6695-8201
Martin RejzekJohn Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK.ORCID http://orcid.org/0000-0002-5091-544X
Petr NovákInstitute of Plant Molecular Biology, Biology Centre CAS, Branisovska 31, Ceske Budejovice, CZ-37005, Czech Republic.ORCID http://orcid.org/0000-0002-5068-9681
Marielle VigourouxJohn Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK.ORCID http://orcid.org/0000-0003-1659-2728
Martin VickersJohn Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK.
Roland H M WoutersJohn Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK.ORCID http://orcid.org/0000-0002-2380-4875
Pirita PaajanenJohn Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK.ORCID http://orcid.org/0000-0002-0561-3717
Burkhard SteuernagelJohn Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK.ORCID http://orcid.org/0000-0002-8284-7728
Jonathan D MooreJohn Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK.ORCID http://orcid.org/0000-0002-5486-0407
Janet HigginsEarlham Institute, Norwich Research Park, Colney Lane, Norwich, NR4 7UZ, UK.ORCID http://orcid.org/0000-0002-7560-2212
David SwarbreckEarlham Institute, Norwich Research Park, Colney Lane, Norwich, NR4 7UZ, UK.ORCID http://orcid.org/0000-0002-5453-1013
Stefan MartensResearch and Innovation Centre, Fondazione Edmund Mach, Via Edmund Mach 1, 38098, San Michele all' Adige (TN), Italy.ORCID http://orcid.org/0000-0001-9913-4882
Colin Y KimWhitehead Institute for Biomedical Research, Cambridge, MA, 02142, USA.ORCID http://orcid.org/0000-0001-9583-9789
Jing-Ke WengWhitehead Institute for Biomedical Research, Cambridge, MA, 02142, USA.ORCID http://orcid.org/0000-0003-3059-0075
Sagadevan MundreeQueensland University of Technology, 2 George St, Brisbane City, QLD, 4000, Australia.ORCID http://orcid.org/0000-0002-4119-9250
Benjamin KilianGlobal Crop Diversity Trust, Platz der Vereinten Nationen 7, 53113, Bonn, Germany.ORCID http://orcid.org/0000-0002-9145-6980
Shiv KumarInternational Center for Agricultural Research in the Dry Areas, Avenue Hafiane Cherkaoui, Rabat, Morocco.ORCID http://orcid.org/0000-0001-8407-3562
Matt LooseSchool of Life Sciences, University of Nottingham, University Park, Nottingham, NG7 2RD, UK.ORCID http://orcid.org/0000-0002-5264-0929
Levi YantSchool of Life Sciences, University of Nottingham, University Park, Nottingham, NG7 2RD, UK.ORCID http://orcid.org/0000-0003-3442-0217
Jiří MacasInstitute of Plant Molecular Biology, Biology Centre CAS, Branisovska 31, Ceske Budejovice, CZ-37005, Czech Republic.ORCID http://orcid.org/0000-0003-0829-1570
Trevor L WangJohn Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK.ORCID http://orcid.org/0000-0002-7727-0952
Cathie MartinJohn Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK.ORCID http://orcid.org/0000-0002-3640-5080
Peter M F EmmrichJohn Innes Centre, Norwich Research Park, Colney Lane, Norwich, NR4 7UH, UK. peter.emmrich@jic.ac.uk.ORCID http://orcid.org/0000-0001-5085-9575
John Innes Centre · GBNorwich Research Park · GBUniversity of Nottingham · GBInstitute of Plant Molecular Biology · CZWhitehead Institute for Biomedical Research · USFondazione Edmund Mach · ITGlobal Crop Diversity TrustQueensland University of Technology · AU

Funding

Biotechnology and Biological Sciences Research Council BBS/E/J/00000150Biotechnology and Biological Sciences Research Council BBS/E/J/000PR9790
6 · The paper itself

Abstract

Grass pea (Lathyrus sativus L.) is a rich source of protein cultivated as an insurance crop in Ethiopia, Eritrea, India, Bangladesh, and Nepal. Its resilience to both drought and flooding makes it a promising crop for ensuring food security in a changing climate. The lack of genetic resources and the crop's association with the disease neurolathyrism have limited the cultivation of grass pea. Here, we present an annotated, long read-based assembly of the 6.5 Gbp L. sativus genome. Using this genome sequence, we have elucidated the biosynthetic pathway leading to the formation of the neurotoxin, β-L-oxalyl-2,3-diaminopropionic acid (β-L-ODAP). The final reaction of the pathway depends on an interaction between L. sativus acyl-activating enzyme 3 (LsAAE3) and a BAHD-acyltransferase (LsBOS) that form a metabolon activated by CoA to produce β-L-ODAP. This provides valuable insight into the best approaches for developing varieties which produce substantially less toxin.

Indexed as

Amino Acids, DiaminoLathyrusGenomicsNeurotoxinsAmino Acids, DiaminoNeurotoxinsoxalyldiaminopropionic acid

Identifiers

PMID36797319
PMCPMC9935904
OpenAlexW4321087993

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.