Evidence map›Paper›PMID 36796984›Full record

ArticleThe Lancet. Global health2023

Spatiotemporal variation in risk of Shigella infection in childhood: a global risk mapping and prediction model using individual participant data.

Hamada S Badr, Josh M Colston, Nhat-Lan H Nguyen, Yen Ting Chen, Eleanor Burnett, Syed Asad Ali, Ajit Rayamajhi, Syed M Satter, Nguyen Van Trang, Daniel Eibach and 50 more

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Article in The Lancet. Global health, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. The Burden and Genomic Characterization ofmedRxiv : the preprint server for health sciences · 2026
    Article
  3. Article
  4. Temporal trends ofFrontiers in public health · 2026
    Observational
  5. Article
  6. Shigellosis.Lancet (London, England) · 2025
    Review
  7. Review
  8. Evaluating the survival and removal ofApplied and environmental microbiology · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

60 authors.

Hamada S BadrDepartment of Earth and Planetary Sciences, Johns Hopkins Krieger School of Arts and Sciences, Baltimore, MA, USA.
Josh M ColstonDivision of Infectious Diseases and International Health, University of Virginia School of Medicine, Charlottesville, VA, USA.
Nhat-Lan H NguyenCollege of Arts and Sciences, University of Virginia, VI, USA.
Yen Ting ChenDepartment of Emergency Medicine, Chi-Mei Medical Center, Tainan, Taiwan.
Eleanor BurnettDivision of Viral Diseases, US Centers for Disease Control and Prevention, Atlanta, GA, USA.
Syed Asad AliDepartment of Pediatrics and Child Health, Aga Khan University, Karachi, Pakistan.
Ajit RayamajhiDepartment of Pediatrics, National Academy of Medical Sciences, Kanti Children's Hospital, Kathmandu, Nepal.
Syed M SatterProgramme for Emerging Infections, Infectious Diseases Division, International Centre for Diarrhoeal Disease Research, Bangladesh (icddr,b), Dhaka, Bangladesh.
Nguyen Van TrangNational Institute of Hygiene and Epidemiology, Ha Noi, Vietnam.
Daniel EibachDepartment of Infectious Disease Epidemiology, Bernhard Nocht Institute for Tropical Medicine (BNITM), Hamburg, Germany.
Ralf KrumkampDepartment of Infectious Disease Epidemiology, Bernhard Nocht Institute for Tropical Medicine (BNITM), Hamburg, Germany.
Jürgen MayDepartment of Infectious Disease Epidemiology, Bernhard Nocht Institute for Tropical Medicine (BNITM), Hamburg, Germany.
Ayola Akim AdegnikaInstitute of Tropical Medicine, Universitätsklinikum Tübingen, Tübingen, Germany.
Gédéon Prince ManouanaInstitute of Tropical Medicine, Universitätsklinikum Tübingen, Tübingen, Germany.
Peter Gottfried KremsnerInstitute of Tropical Medicine, Universitätsklinikum Tübingen, Tübingen, Germany.
Roma ChilengiCentre for Infectious Disease Research in Zambia, Lusaka, Zambia.
Luiza HatyokaEnteric diseases and Vaccines Unit, Centre for Infectious Disease Research in Zambia, Lusaka, Zambia.
Amanda K DebesDepartment of International Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA.
Jerome AteudjieuFaculty of Medicine and Pharmaceutical Sciences, University of Dschang, Dschang, Cameroon; Department of Health Research, M A SANTE (Meileur Acces aux Soins en Santé), Yaoundé, Cameroon; Division of Health Operations Research, Cameroon Ministry of Public Health, Yaoundé, Cameroon.
Abu S G FaruqueCentre for Nutrition & Food Security, International Centre for Diarrhoeal Disease Research, Bangladesh (icddr,b), Dhaka, Bangladesh.
M Jahangir HossainMedical Research Council Unit, The Gambia at the London School of Hygiene & Tropical Medicine, Banjul, The Gambia.
Suman KanungoNational Institute of Cholera and Enteric Diseases, Kolkota, India.
Karen L KotloffDepartment of Pediatrics, University of Maryland School of Medicine, Baltimore, MD, USA.
Inácio MandomandoCentro de Investigação em Saúde de Manhiça, Manhica, Mozambique.
M Imran NisarDepartment of Pediatrics and Child Health, Aga Khan University, Karachi, Pakistan.
Richard OmoreKenya Medical Research Institute, Center for Global Health Research, Kisumu, Nyanza, Kenya.
Samba O SowCentre pour le Développement des Vaccins, Mali, Bamako, Mali.
Anita K M ZaidiDepartment of Pediatrics and Child Health, Aga Khan University, Karachi, Pakistan.
Nathalie LambrechtInstitute of Public Health, Charité - Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin and Humboldt-Universität zu Berlin, Berlin, Germany; Research Department 2, Potsdam Institute for Climate Impact Research (PIK), Member of the Leibniz Association, Potsdam, Germany.
Bright AduDepartment of Immunology, Noguchi Memorial Institute for Medical Research, University of Ghana, Legon, Ghana.
Nicola PageCentre for Enteric Diseases, National Institute for Communicable Diseases, Pretoria, South Africa.
James A Platts-MillsDivision of Infectious Diseases and International Health, University of Virginia School of Medicine, Charlottesville, VA, USA.
Cesar Mavacala FreitasHospital Pediátrico David Bernardino, Luanda, Angola.
Tuula PelkonenNew Children's Hospital, Pediatric Research Center and Helsinki University Hospital, Helsinki, Finland.
Per AshornCentre for Child, Adolescent, and Maternal Health Research, Faculty of Medicine and Health Technology, Tampere University and Tampere University Hospital, Tampere, Finland.
Kenneth MaletaCollege of Medicine, University of Malawi, Blantyre, Malawi.
Tahmeed AhmedNutrition and Clinical Services Division, International Centre for Diarrhoeal Disease Research, Bangladesh (icddr,b), Dhaka, Bangladesh.
Pascal BessongHIV/AIDS & Global Health Research Programme, University of Venda, Thohoyandou, Limpopo, South Africa.
Zulfiqar A BhuttaCenter of Excellence in Women and Child Health, Aga Khan University, Karachi, Pakistan.
Carl MasonDepartment of Enteric Diseases, Armed Forces Research Institute of Medical Sciences (AFRIMS), Bangkok, Thailand.
Estomih MdumaHaydom Global Health Institute, Haydom, Tanzania.
Maribel P OlorteguiAsociacion Benefica PRISMA, Iquitos, Peru.
Pablo Peñataro YoriDivision of Infectious Diseases and International Health, University of Virginia School of Medicine, Charlottesville, VA, USA.
Aldo A M LimaDepartment of Physiology and Pharmacology, Faculty of Medicine, Federal University of Ceará, Fortaleza, Brazil.
Gagandeep KangDepartment of Gastrointestinal Sciences, Christian Medical College, Vellore, India.
Jean HumphreyDepartment of International Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA.
Robert NtoziniZvitambo Institute for Maternal and Child Health Research, Harare, Zimbabwe.
Andrew J PrendergastBlizard Institute, Queen Mary University of London, London, UK.
Kazuhisa OkadaResearch Institute for Microbial Diseases, Osaka University, Osaka, Japan.
Warawan WongbootDepartment of Medical Sciences, National Institute of Health, Nonthaburi, Thailand.
Nina LangelandDepartment of Clinical Science, University of Bergen, Bergen, Norway.
Sabrina J MoyoDepartment of Clinical Science, University of Bergen, Bergen, Norway.
James GaensbauerCenter for Global Health, Department of Epidemiology, Colorado School of Public Health, Aurora, CO, USA.
Mario MelgarPediatric Infectious Diseases, Hospital Roosevelt, Guatemala City, Guatemala.
Matthew FreemanGangarosa Department of Environmental Health, Rollins School of Public Health, Emory University, Atlanta, 30322, GA, USA.
Anna N ChardGangarosa Department of Environmental Health, Rollins School of Public Health, Emory University, Atlanta, 30322, GA, USA.
Vonethalom ThongpaseuthLaboratory and Treatment Unit, Center for Malariology, Parasitology, and Entomology, Ministry of Health, Vientiane, Lao PDR.
Eric HouptDivision of Infectious Diseases and International Health, University of Virginia School of Medicine, Charlottesville, VA, USA.
Benjamin F ZaitchikDepartment of Earth and Planetary Sciences, Johns Hopkins Krieger School of Arts and Sciences, Baltimore, MA, USA. Electronic address: zaitchik@jhu.edu.
Margaret N KosekDivision of Infectious Diseases and International Health, University of Virginia School of Medicine, Charlottesville, VA, USA.

Funding

Global Geospatial Mapping and Modeling of Household-level Covariates of Infectious Disease Transmission and Child HealthR03AI151564 · NIAID · UNIVERSITY OF VIRGINIA · PI KOSEK, MARGARET N · 2020 to 2021
$160k
NIAID NIH HHS R03 AI151564Wellcome TrustWellcome Trust 108065/Z/15/Z
6 · The paper itself

Abstract

backgroundDiarrhoeal disease is a leading cause of childhood illness and death globally, and Shigella is a major aetiological contributor for which a vaccine might soon be available. The primary objective of this study was to model the spatiotemporal variation in paediatric Shigella infection and map its predicted prevalence across low-income and middle-income countries (LMICs).

methodsIndividual participant data for Shigella positivity in stool samples were sourced from multiple LMIC-based studies of children aged 59 months or younger. Covariates included household-level and participant-level factors ascertained by study investigators and environmental and hydrometeorological variables extracted from various data products at georeferenced child locations. Multivariate models were fitted and prevalence predictions obtained by syndrome and age stratum.

findings20 studies from 23 countries (including locations in Central America and South America, sub-Saharan Africa, and south and southeast Asia) contributed 66 563 sample results. Age, symptom status, and study design contributed most to model performance followed by temperature, wind speed, relative humidity, and soil moisture. Probability of Shigella infection exceeded 20% when both precipitation and soil moisture were above average and had a 43% peak in uncomplicated diarrhoea cases at 33°C temperatures, above which it decreased. Compared with unimproved sanitation, improved sanitation decreased the odds of Shigella infection by 19% (odds ratio [OR]=0·81 [95% CI 0·76-0·86]) and open defecation decreased them by 18% (OR=0·82 [0·76-0·88]).

interpretationThe distribution of Shigella is more sensitive to climatological factors, such as temperature, than previously recognised. Conditions in much of sub-Saharan Africa are particularly propitious for Shigella transmission, although hotspots also occur in South America and Central America, the Ganges-Brahmaputra Delta, and the island of New Guinea. These findings can inform prioritisation of populations for future vaccine trials and campaigns.

fundingNASA, National Institutes of Health-The National Institute of Allergy and Infectious Diseases, and Bill & Melinda Gates Foundation.

Indexed as

Dysentery, BacillaryAfrica South of the SaharaChildDiarrheaFamily CharacteristicsGlobal HealthHumansTemperature

Identifiers

PMID36796984
PMCPMC10020138

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.