Evidence map›Paper›PMID 36795789›Full record

ArticlePloS one2023

Genomic diversity in Fructobacillus spp. isolated from fructose-rich niches.

Florencia Mohamed, Luciana G Ruiz Rodriguez, Azul Zorzoli, Helge C Dorfmueller, Raúl R Raya, Fernanda Mozzi

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Florencia MohamedCentro de Referencia para Lactobacilos (CERELA)-CONICET, San Miguel de Tucumán, Tucumán, Argentina.
Luciana G Ruiz RodriguezCentro de Referencia para Lactobacilos (CERELA)-CONICET, San Miguel de Tucumán, Tucumán, Argentina.ORCID 0000-0001-6887-5784
Azul ZorzoliDivision of Molecular Microbiology, School of Life Sciences, University of Dundee, Dundee, United Kingdom.
Helge C DorfmuellerDivision of Molecular Microbiology, School of Life Sciences, University of Dundee, Dundee, United Kingdom.
Raúl R RayaCentro de Referencia para Lactobacilos (CERELA)-CONICET, San Miguel de Tucumán, Tucumán, Argentina.ORCID 0000-0002-6387-160X
Fernanda MozziCentro de Referencia para Lactobacilos (CERELA)-CONICET, San Miguel de Tucumán, Tucumán, Argentina.ORCID 0000-0002-2661-7661
Centro Científico Tecnológico - Tucumán · ARUniversity of Dundee · GB

Funding

Wellcome TrustWellcome Trust 105606/Z/14/ZWellcome Trust 109357/Z/15/Z
6 · The paper itself

Abstract

The Fructobacillus genus is a group of obligately fructophilic lactic acid bacteria (FLAB) that requires the use of fructose or another electron acceptor for their growth. In this work, we performed a comparative genomic analysis within the genus Fructobacillus by using 24 available genomes to evaluate genomic and metabolic differences among these organisms. In the genome of these strains, which varies between 1.15- and 1.75-Mbp, nineteen intact prophage regions, and seven complete CRISPR-Cas type II systems were found. Phylogenetic analyses located the studied genomes in two different clades. A pangenome analysis and a functional classification of their genes revealed that genomes of the first clade presented fewer genes involved in the synthesis of amino acids and other nitrogen compounds. Moreover, the presence of genes strictly related to the use of fructose and electron acceptors was variable within the genus, although these variations were not always related to the phylogeny.

Indexed as

LactobacillalesLeuconostocaceaeFructoseGenomicsPhylogenyFructose

Identifiers

PMID36795789
PMCPMC9934391
OpenAlexW4321003686

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.