Evidence map›Paper›PMID 36795266›Full record

ArticleExperimental & applied acarology2023

Genetic analysis of the tomato russet mite provides evidence of oligophagy and a widespread pestiferous haplotype.

Mercia Elias Duarte, Mariusz Lewandowski, Renata Santos de Mendonça, Sauro Simoni, Denise Navia

Abstract read
PubMed Publisher
In one paragraph

Article in Experimental & applied acarology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.8field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 5 institutions in 4 countries.

Mercia Elias DuarteFederal University of Piauí, Campus Amilcar Ferreira Sobral, Floriano, PI, CEP: 64808-605, Brazil.ORCID https://orcid.org/0000-0002-4953-0139
Mariusz LewandowskiSection of Applied Entomology, Department of Plant Protection, Institute of Horticultural Sciences, Warsaw University of Life Sciences, ul. Nowoursynowska 159, 02-776, Warsaw, Poland.ORCID http://orcid.org/0000-0001-5360-0382
Renata Santos de MendonçaFaculty of Agronomy and Veterinary Medicine, University of Brasília, ICC Sul Campus Darcy Ribeiro, Brasília, DF, CEP 70910-970, Brazil.ORCID https://orcid.org/0000-0002-0514-6442
Sauro SimoniCREA - DC Council for Agricultural Research and Economics-Research Centre for Plant Protection and Certification, Via di Lanciola12/a, 50125, Florence, Italy.ORCID https://orcid.org/0000-0003-2396-2344
Denise NaviaCBGP, Institut Agro, CIRAD, INRAE, IRD, Univ Montpellier, Centre de Biologie pour la Gestion des Populations, Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), 755 Avenue du Campus Agropolis, CS 30016, 34988, Montferrier sur Lez Cedex, France. denise.navia@inrae.fr.ORCID https://orcid.org/0000-0003-3716-4984
Centre de Coopération Internationale en Recherche Agronomique pour le Développement · FRCereal Research Centre · ITUniversidade de Brasília · BRUniversidade Federal do Piauí · BRWarsaw University of Life Sciences · PL

Funding

Brazilian Coordination for the Improvement of Higher Education Personnel (CAPES), National Program of Post-Doctoral in Agronomy for the financial support of RSM (CAPES-PNPD/Agronomy) 88882.305808/2018-1Conselho Nacional de Desenvolvimento Científico e Tecnológico 380382/2020-2Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) 158161/2018-1Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) 3121322017-4Fundacão de Apoio a Pesquisa do Distrito Federal (FAPDF) 193.001.418./2016Ministry of Agricultural, Food and Forestry Policies (MIPAAF) and Council for Agricultural Research and Economics (CREA), Italy, for funding 'Support activities in the field of organic farming for the maintenance of long-term experimental devices Long-Term Experiments (LTEs) and the strengthening of existing networks of relationships at national and international level (RETIBIO) Ministerial Decree 92606, 22/12/2014'Support activities to research networks and technical and to regulatory activities of the MIPAAF in the field of organic farming (RETIBIO II) Ministerial Decree 95785, 22/12/16
6 · The paper itself

Abstract

Worldwide, the tomato russet mite (TRM), Aculops lycopersici (Eriophyidae), is a key pest on cultivated tomato in addition to infesting other cultivated and wild Solanaceae; however, basic information on TRM supporting effective control strategies is still lacking, mainly regarding its taxonomic status and genetic diversity and structure. As A. lycopersici is reported on different species and genera of host plants, populations associated with different host plants may constitute specialized cryptic species, as shown for other eriophyids previously considered generalists. The main aims of this study were to (i) confirm the TRM taxonomic unity of populations from different host plants and localities as well as the species' oligophagy, and (ii) to advance the understanding of TRM host relationship and invasion history. For this purpose, we evaluated the genetic variability and structure of populations from different host plants along crucial areas of occurrence, including the area of potential origin, based on DNA sequences of mitochondrial (cytochrome c oxidase subunit I) and nuclear (internal transcribed spacer, D2 28S) genomic regions. Specimens from South America (Brazil) and Europe (France, Italy, Poland, The Netherlands) were collected from tomato and other solanaceous species from the genera Solanum and Physalis. Final TRM datasets were composed of 101, 82 and 50 sequences from the COI (672 bp), ITS (553 bp) and D2 (605 bp) regions, respectively. Distributions and frequencies of haplotypes (COI) and genotypes (D2 and ITS1) were inferred; pairwise genetic distance comparisons, and phylogenetic analysis were performed, including Bayesian Inference (BI) combined analysis. Our results showed that genetic divergences for mitochondrial and nuclear genomic regions from TRM associated with different host plants were lower than those observed in other eriophyid taxa, confirming conspecificity of TRM populations and oligophagy of this eriophyid mite. Four haplotypes (cH) were identified from the COI sequences with cH1 being the most frequent, representing 90% of all sequences occurring in all host plants studied (Brazil, France, The Netherlands); the other haplotypes were present exclusively in Brazilian populations. Six variants (I) were identified from the ITS sequences: I-1 was the most frequent (76.5% of all sequences), spread in all countries and associated with all host plants, except S. nigrum. Just one D2 sequence variant was found in all studied countries. The genetic homogeneity among populations highlights the occurrence of a highly invasive and oligophagous haplotype. These results failed to corroborate the hypothesis that differential symptomatology or damage intensity among tomato varieties and solanaceous host plants could be due to the genetic diversity of the associated mite populations. The genetic evidence, along with the history of spread of cultivated tomato, corroborates the hypothesis of a South American origin of TRM.

Indexed as

MitesSolanum lycopersicumAnimalsBayes TheoremBrazilGenetic VariationHaplotypesPhylogenyAculops lycopersiciEriophyidaeHost relationshipInvasion biologyMolecular systematicsSolanaceae

Identifiers

PMID36795266
OpenAlexW4321002342

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.