Evidence map›Paper›PMID 36794352›Full record

ArticleAnimal models and experimental medicine2024

Development of RPA-Cas12a-fluorescence assay for rapid and reliable detection of human bocavirus 1.

Weidong Qian, Xuefei Wang, Ting Wang, Jie Huang, Qian Zhang, Yongdong Li, Si Chen

Abstract read
In one paragraph

Article in Animal models and experimental medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Weidong QianSchool of Food and Biological Engineering, Shaanxi University of Science and Technology, Xi'an, P. R. China.ORCID 0000-0003-4612-4351
Xuefei WangSchool of Food and Biological Engineering, Shaanxi University of Science and Technology, Xi'an, P. R. China.
Ting WangSchool of Food and Biological Engineering, Shaanxi University of Science and Technology, Xi'an, P. R. China.
Jie HuangSchool of Food and Biological Engineering, Shaanxi University of Science and Technology, Xi'an, P. R. China.
Qian ZhangDepartment of Dermatology, Huazhong University of Science and Technology Union Shenzhen Hospital, Shenzhen, P. R. China.ORCID 0000-0003-4516-3455
Yongdong LiNingbo Municipal Center for Disease Control and Prevention, Ningbo, P. R. China.
Si ChenMedical College of Shenzhen University, Shenzhen, P. R. China.

Funding

Medical Scientific Research Foundation of Guangdong Province A2019502Nanshan District Science and Technology Plan Project NS2022022Natural Science Foundation of China 81973531Science and Technology Plan Project of Xi'an 22GXFW0007Scientific Research Program Funded by Shaanxi Provincial Education Department 22JC010Shenzhen Science and Technology Innovation Commission 20200812211704001
6 · The paper itself

Abstract

Human bocavirus (HBoV) 1 is considered an important pathogen that mainly affects infants aged 6-24 months, but preventing viral transmission in resource-limited regions through rapid and affordable on-site diagnosis of individuals with early infection of HBoV1 remains somewhat challenging. Herein, we present a novel faster, lower cost, reliable method for the detection of HBoV1, which integrates a recombinase polymerase amplification (RPA) assay with the CRISPR/Cas12a system, designated the RPA-Cas12a-fluorescence assay. The RPA-Cas12a-fluorescence system can specifically detect target gene levels as low as 0.5 copies of HBoV1 plasmid DNA per microliter within 40 min at 37°C without the need for sophisticated instruments. The method also demonstrates excellent specificity without cross-reactivity to non-target pathogens. Furthermore, the method was appraised using 28 clinical samples, and displayed high accuracy with positive and negative predictive agreement of 90.9% and 100%, respectively. Therefore, our proposed rapid and sensitive HBoV1 detection method, the RPA-Cas12a-fluorescence assay, shows promising potential for early on-site diagnosis of HBoV1 infection in the fields of public health and health care. The established RPA-Cas12a-fluorescence assay is rapid and reliable method for human bocavirus 1 detection. The RPA-Cas12a-fluorescence assay can be completed within 40 min with robust specificity and sensitivity of 0.5 copies/μl.

Indexed as

Human bocavirusCRISPR-Cas SystemsDNA, ViralFluorescenceHumansNucleic Acid Amplification TechniquesParvoviridae InfectionsRecombinasesSensitivity and SpecificityDNA, ViralRecombinasesCRISPR‐Cas12adetectionhuman bocavirus 1on‐site diagnosisrecombinase polymerase amplification

Identifiers

PMID36794352
PMCPMC11079142

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.