Evidence map›Paper›PMID 36793550›Full record

ArticlePHAGE (New Rochelle, N.Y.)2022

Comparative Genomics of Six Lytic

Albert C Vill, Véronique A Delesalle, Brianne E Tomko, Katherine B Lichty, Madison S Strine, Alexandra A Guffey, Elizabeth A Burton, Natalie T Tanke, Greg P Krukonis

Open access · diamondAbstract read
In one paragraph

Article in PHAGE (New Rochelle, N.Y.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

  1. Bacteriophage-Based Control of Methicillin-ResistantAntibiotics (Basel, Switzerland) · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Albert C VillDepartment of Biology, Gettysburg College, Gettysburg, Pennsylvania, USA.ORCID https://orcid.org/0000-0001-5982-0298
Véronique A DelesalleDepartment of Biology, Gettysburg College, Gettysburg, Pennsylvania, USA.ORCID https://orcid.org/0000-0003-2437-5512
Brianne E TomkoDepartment of Biology, Gettysburg College, Gettysburg, Pennsylvania, USA.
Katherine B LichtyDepartment of Biology, Gettysburg College, Gettysburg, Pennsylvania, USA.
Madison S StrineDepartment of Biology, Gettysburg College, Gettysburg, Pennsylvania, USA.
Alexandra A GuffeyDepartment of Biology, Gettysburg College, Gettysburg, Pennsylvania, USA.
Elizabeth A BurtonDepartment of Biology, Gettysburg College, Gettysburg, Pennsylvania, USA.
Natalie T TankeDepartment of Biology, Gettysburg College, Gettysburg, Pennsylvania, USA.
Greg P KrukonisDepartment of Biology, Gettysburg College, Gettysburg, Pennsylvania, USA.
Gettysburg College · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Despite their importance to microbial dynamics involving Materials and Methods: Phages were isolated from soil samples collected from various sites in the southwest U.S. deserts on a wild Results: Six Siphoviruses with high nucleotide and amino acid similarity to each other (>80%) but very limited similarity to phages currently in GenBank were isolated. These phages have double-stranded DNA genomes (55,312 to 56,127 bp) with 86-91 putative protein coding genes, and a low GC content. Comparative genomics reveal differences in loci encoding proteins that are putatively involved in bacterial adsorption with evidence for genomic mosaicism and a possible role for small genes. Conclusions: A comparative approach provides insights into phage evolution, including the role of indels in protein folding.

Indexed as

Bacillus subtiliscomparative genomicsfunctional annotationgene conservationsouthwest U.S. deserts

Identifiers

PMID36793550
PMCPMC9917325
OpenAlexW4296510781

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.