Evidence map›Paper›PMID 36792979›Full record

ArticleBMC microbiology2023

Generalist arbuscular mycorrhizal fungi dominated heavy metal polluted soils at two artisanal and small - scale gold mining sites in southeastern Ecuador.

Juan Pablo Suárez, Paulo Herrera, Carolina Kalinhoff, Oscar Vivanco-Galván, Selvaraj Thangaswamy

Abstract read
In one paragraph

Article in BMC microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Juan Pablo SuárezDepartamento de Ciencias Biológicas y Agropecuarias, Universidad Técnica Particular de Loja, UTPL, Loja, Ecuador. jpsuarez@utpl.edu.ec.ORCID 0000-0002-9453-5545
Paulo HerreraDepartamento de Ciencias Biológicas y Agropecuarias, Universidad Técnica Particular de Loja, UTPL, Loja, Ecuador.
Carolina KalinhoffDepartamento de Ciencias Biológicas y Agropecuarias, Universidad Técnica Particular de Loja, UTPL, Loja, Ecuador.
Oscar Vivanco-GalvánDepartamento de Ciencias Biológicas y Agropecuarias, Universidad Técnica Particular de Loja, UTPL, Loja, Ecuador.
Selvaraj ThangaswamyDepartamento de Ciencias Biológicas y Agropecuarias, Universidad Técnica Particular de Loja, UTPL, Loja, Ecuador.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundArtisanal and small-scale gold mining activities are producing contamination with heavy metals and metalloids (HMM) into soils and water worldwide. The HMM are considered as one of the major abiotic stresses due to their long-term persistence in soil. In this context, arbuscular mycorrhizal fungi (AMF) confer resistance to a variety of abiotic plant stressors including HMM. However, little is known regarding the diversity and composition of AMF communities in heavy metal polluted sites in Ecuador.

methodsIn order to investigate the AMF diversity, root samples and associated soil of six plant species were collected from two sites polluted by heavy metals, located in Zamora-Chinchipe province, Ecuador. The AMF 18S nrDNA genetic region was analyzed and sequenced, and fungal OTUs were defined based on 99% sequence similarity. Results were contrasted with AMF communities from a natural forest and from reforestation sites located in the same province and with available sequences in GenBank.

resultsThe main pollutants in soils were Pb, Zn, Hg, Cd and Cu with concentrations exceeding the soil reference value for agricultural use. Molecular phylogeny and OTU delimitation showed 19 OTUs, the family Glomeraceae was the most OTU-rich followed by Archaeosporaceae, Acaulosporaceae, Ambisporaceae and Paraglomeraceae. Most of the OTUs (11 of 19) have been found at other locations worldwide, 14 OTUs were proven from nearby non-contaminated sites in Zamora-Chinchipe.

conclusionOur study showed that there are no specialized OTUs at the studied HMM polluted sites, but rather generalists adapted to a wide variety of habitats. Their potential role in phytoremediation approaches remains to be investigated.

Indexed as

GlomeromycotaMetals, HeavyMycorrhizaeSoil PollutantsEcuadorFungiGoldMiningPlant RootsPlantsSoilSoil MicrobiologyGoldMetals, HeavySoilSoil Pollutants18S nrDNAAMF communitiesAMF-OTUsGlomeromycotinaHeavy metals

Identifiers

PMID36792979
PMCPMC9930361

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.