Evidence map›Paper›PMID 36792917›Full record

ArticleNature communications2023

Uphill energy transfer mechanism for photosynthesis in an Antarctic alga.

Makiko Kosugi, Masato Kawasaki, Yutaka Shibata, Kojiro Hara, Shinichi Takaichi, Toshio Moriya, Naruhiko Adachi, Yasuhiro Kamei, Yasuhiro Kashino, Sakae Kudoh and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 30 citations in OpenAlex.

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  10. Supramolecular chirality in self-assembly of zinc protobacteriochlorophyll-d analogs possessing enantiomeric esterifying groups.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 8 institutions in 1 country.

Makiko Kosugi *Astrobiology Center, 2-21-1 Osawa, Mitaka, Tokyo, 181-8588, Japan. mkosugi@nibb.ac.jp.ORCID 0000-0002-7415-1536
Masato Kawasaki *Structural Biology Research Center, Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization (KEK), 1-1 Oho, Tsukuba, Ibaraki, 305-0801, Japan.
Yutaka Shibata *Department of Chemistry, Graduate School of Science, Tohoku University, 6-3 Aza Aoba Aramaki, Aoba-ku, Sendai, 980-8578, Japan. shibata@m.tohoku.ac.jp.ORCID 0000-0002-7510-503X
Kojiro HaraDepartment of Biological Production, Akita Prefectural University, 241-438 Kaidobata-nishi, Shimoshinjo-nakano, Akita, 010-0195, Japan.ORCID 0000-0002-5423-2419
Shinichi TakaichiDepartment of Molecular Microbiology, Tokyo University of Agriculture, 1-1 Sakuragaoka, Setagaya-ku, Tokyo, 156-8502, Japan.ORCID 0000-0002-1621-9141
Toshio MoriyaStructural Biology Research Center, Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization (KEK), 1-1 Oho, Tsukuba, Ibaraki, 305-0801, Japan.ORCID 0000-0001-7226-5487
Naruhiko AdachiStructural Biology Research Center, Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization (KEK), 1-1 Oho, Tsukuba, Ibaraki, 305-0801, Japan.ORCID 0000-0003-1539-6696
Yasuhiro KameiNational Institute for Basic Biology, National Institutes of Natural Sciences, 38 Nishigonaka, Myodaiji, Okazaki, Aichi, 444-8585, Japan.ORCID 0000-0001-6382-1365
Yasuhiro KashinoGraduate School of Science, University of Hyogo, 3-2-1 Kohto, Kamigohri, Ako-gun, Hyogo, 678-1297, Japan.ORCID 0000-0002-4278-9359
Sakae KudohNational Institute of Polar Research, Research Organization of Information and Systems, 10-3 Midori-cho, Tachikawa, Tokyo, 190-8518, Japan.ORCID 0000-0002-8712-5767
Hiroyuki KoikeDepartment of Biological Sciences, Faculty of Science and Engineering, Chuo University, 1-13-27 Kasuga, Bunkyo-ku, Tokyo, 112-8551, Japan.ORCID 0000-0002-3117-894X
Toshiya SendaStructural Biology Research Center, Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization (KEK), 1-1 Oho, Tsukuba, Ibaraki, 305-0801, Japan. toshiya.senda@kek.jp.ORCID 0000-0002-5153-928X
High Energy Accelerator Research Organization · JPNational Institute for Basic Biology · JPAkita Prefectural University · JPChuo University · JPThe Graduate University for Advanced Studies, SOKENDAI · JPTohoku University · JPTokyo University of Agriculture · JPUniversity of Hyogo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Prasiola crispa, an aerial green alga, forms layered colonies under the severe terrestrial conditions of Antarctica. Since only far-red light is available at a deep layer of the colony, P. crispa has evolved a molecular system for photosystem II (PSII) excitation using far-red light with uphill energy transfer. However, the molecular basis underlying this system remains elusive. Here, we purified a light-harvesting chlorophyll (Chl)-binding protein complex from P. crispa (Pc-frLHC) that excites PSII with far-red light and revealed its ring-shaped structure with undecameric 11-fold symmetry at 3.13 Å resolution. The primary structure suggests that Pc-frLHC evolved from LHCI rather than LHCII. The circular arrangement of the Pc-frLHC subunits is unique among eukaryote LHCs and forms unprecedented Chl pentamers at every subunit‒subunit interface near the excitation energy exit sites. The Chl pentamers probably contribute to far-red light absorption. Pc-frLHC's unique Chl arrangement likely promotes PSII excitation with entropy-driven uphill excitation energy transfer.

Indexed as

PhotosynthesisPhotosystem I Protein ComplexAntarctic RegionsChlorophyllEnergy TransferLight-Harvesting Protein ComplexesPhotosystem II Protein ComplexThylakoidsChlorophyllLight-Harvesting Protein ComplexesPhotosystem II Protein ComplexPhotosystem I Protein Complex

Identifiers

PMID36792917
PMCPMC9931709
OpenAlexW4321003868

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.