Evidence map›Paper›PMID 36792689›Full record

ArticleCommunications biology2023

Uncovering hidden network architecture from spiking activities using an exact statistical input-output relation of neurons.

Safura Rashid Shomali, Seyyed Nader Rasuli, Majid Nili Ahmadabadi, Hideaki Shimazaki

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Safura Rashid ShomaliSchool of Cognitive Sciences, Institute for Research in Fundamental Sciences (IPM), Tehran, 19395-5746, Iran. safura@ipm.ir.ORCID 0000-0003-0529-2535
Seyyed Nader RasuliSchool of Physics, Institute for Research in Fundamental Sciences (IPM), Tehran, 19395-5531, Iran.
Majid Nili AhmadabadiControl and Intelligent Processing Center of Excellence, School of Electrical and Computer Engineering, College of Engineering, University of Tehran, Tehran, 14395-515, Iran.
Hideaki ShimazakiGraduate School of Informatics, Kyoto University, Kyoto, 606-8501, Japan. h.shimazaki@i.kyoto-u.ac.jp.ORCID 0000-0001-7794-3064
Institute for Research in Fundamental Sciences · IRHokkaido University · JPUniversity of Tehran · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Identifying network architecture from observed neural activities is crucial in neuroscience studies. A key requirement is knowledge of the statistical input-output relation of single neurons in vivo. By utilizing an exact analytical solution of the spike-timing for leaky integrate-and-fire neurons under noisy inputs balanced near the threshold, we construct a framework that links synaptic type, strength, and spiking nonlinearity with the statistics of neuronal population activity. The framework explains structured pairwise and higher-order interactions of neurons receiving common inputs under different architectures. We compared the theoretical predictions with the activity of monkey and mouse V1 neurons and found that excitatory inputs given to pairs explained the observed sparse activity characterized by strong negative triple-wise interactions, thereby ruling out the alternative explanation by shared inhibition. Moreover, we showed that the strong interactions are a signature of excitatory rather than inhibitory inputs whenever the spontaneous rate is low. We present a guide map of neural interactions that help researchers to specify the hidden neuronal motifs underlying observed interactions found in empirical data.

Indexed as

Nerve NetNeuronsAction PotentialsAnimalsMiceModels, Neurological

Identifiers

PMID36792689
PMCPMC9932086
OpenAlexW4321002179

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.