Evidence map›Paper›PMID 36792124›Full record

ArticleJournal for immunotherapy of cancer2023

CD103 and CD39 coexpression identifies neoantigen-specific cytotoxic T cells in colorectal cancers with low mutation burden.

Jitske van den Bulk, Manon van der Ploeg, Marieke E Ijsselsteijn, Dina Ruano, Ruud van der Breggen, Rebekka Duhen, Koen C M J Peeters, Arantza Fariña-Sarasqueta, Els M E Verdegaal, Sjoerd H van der Burg and 2 more

Open access · goldAbstract read
In one paragraph

Article in Journal for immunotherapy of cancer, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 28 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Trial
  4. CD39 on CD8European journal of immunology · 2026
    Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Jitske van den BulkDepartment of Pathology, Leiden University Medical Center, Leiden, The Netherlands.ORCID 0000-0002-2056-9478
Manon van der PloegDepartment of Pathology, Leiden University Medical Center, Leiden, The Netherlands.
Marieke E IjsselsteijnDepartment of Pathology, Leiden University Medical Center, Leiden, The Netherlands.
Dina RuanoDepartment of Pathology, Leiden University Medical Center, Leiden, The Netherlands.
Ruud van der BreggenDepartment of Pathology, Leiden University Medical Center, Leiden, The Netherlands.
Rebekka DuhenBasic Immunology Lab, Earle A Chiles Research Institute, Portland, Oregon, USA.
Koen C M J PeetersDepartment of Surgery, Leiden University Medical Center, Leiden, The Netherlands.
Arantza Fariña-SarasquetaDepartment of Pathology, Leiden University Medical Center, Leiden, The Netherlands.
Els M E VerdegaalDepartment of Medical Oncology, Oncode Institute, Leiden University Medical Center, Leiden, The Netherlands.ORCID 0000-0002-4449-8707
Sjoerd H van der BurgDepartment of Medical Oncology, Oncode Institute, Leiden University Medical Center, Leiden, The Netherlands.
Thomas DuhenAnti-Cancer Immune Response Lab, Earle A Chiles Research Institute, Portland, Oregon, USA.ORCID 0000-0002-3043-9116
Noel F C C de MirandaDepartment of Pathology, Leiden University Medical Center, Leiden, The Netherlands N.F.de_Miranda@lumc.nl.ORCID 0000-0001-6122-1024
Leiden University Medical Center · NLProvidence Portland Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundExpression of CD103 and CD39 has been found to pinpoint tumor-reactive CD8 EXPERIMENTAL

designWhole-exome and RNA sequencing of 11 mismatch repair-proficient (MMR-proficient) CRCs and corresponding healthy tissues were performed to determine the presence of putative neoantigens. In parallel, tumor-infiltrating lymphocytes (TILs) were cultured from the tumor fragments and, in parallel, CD8

resultsNeoantigen-directed reactivity was only encountered in bulk TIL populations and CD103

conclusionCoexpression of CD103 and CD39 is characteristic of neoantigen-specific CD8

Indexed as

CD8-Positive T-LymphocytesColorectal NeoplasmsHumansMutationT-Lymphocytes, CytotoxicT-Lymphocyte SubsetsAntigensCD8-Positive T-LymphocytesGastrointestinal NeoplasmsImmunotherapyLymphocytes, Tumor-Infiltrating

Identifiers

PMID36792124
PMCPMC9933759
OpenAlexW4320914785

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.