Evidence map›Paper›PMID 36791911›Full record

ArticleThe Journal of biological chemistry2023

Conformational dynamics control assembly of an extremely long bacteriophage tail tube.

Emily Agnello, Joshua Pajak, Xingchen Liu, Brian A Kelch

Open access · goldFull text read
In one paragraph

Article in The Journal of biological chemistry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. The Lord of the Rings: Cysteine bonds crosslink the tail of siphovirus.Protein science : a publication of the Protein Society · 2026
    Article
  2. Article
  3. mBio · 2026
    Article
  4. Article
  5. A dinoflagellate-infecting giant virus with a micron-length tail.bioRxiv : the preprint server for biology · 2025
    Article
  6. Viruses · 2025
    Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Emily AgnelloDepartment of Biochemistry and Molecular Biotechnology, University of Massachusetts Chan Medical School, Worcester Massachusetts, USA.
Joshua PajakDepartment of Biochemistry and Molecular Biotechnology, University of Massachusetts Chan Medical School, Worcester Massachusetts, USA.
Xingchen LiuDepartment of Biochemistry and Molecular Biotechnology, University of Massachusetts Chan Medical School, Worcester Massachusetts, USA.
Brian A KelchDepartment of Biochemistry and Molecular Biotechnology, University of Massachusetts Chan Medical School, Worcester Massachusetts, USA. Electronic address: brian.kelch@umassmed.edu.
University of Massachusetts Chan Medical School · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tail tube assembly is an essential step in the lifecycle of long-tailed bacteriophages. Limited structural and biophysical information has impeded an understanding of assembly and stability of their long, flexible tail tubes. The hyperthermophilic phage P74-26 is particularly intriguing as it has the longest tail of any known virus (nearly 1 μm) and is the most thermostable known phage. Here, we use structures of the P74-26 tail tube along with an in vitro system for studying tube assembly kinetics to propose the first molecular model for the tail tube assembly of long-tailed phages. Our high-resolution cryo-EM structure provides insight into how the P74-26 phage assembles through flexible loops that fit into neighboring rings through tight "ball-and-socket"-like interactions. Guided by this structure, and in combination with mutational, light scattering, and molecular dynamics simulations data, we propose a model for the assembly of conserved tube-like structures across phage and other entities possessing tail tube-like proteins. We propose that formation of a full ring promotes the adoption of a tube elongation-competent conformation among the flexible loops and their corresponding sockets, which is further stabilized by an adjacent ring. Tail assembly is controlled by the cooperative interaction of dynamic intraring and interring contacts. Given the structural conservation among tail tube proteins and tail-like structures, our model can explain the mechanism of high-fidelity assembly of long, stable tubes.

Indexed as

BacteriophagesCaudoviralesModels, MolecularMolecular ConformationViral Tail ProteinsViral Tail Proteinsbacteriophagecryo-EMmolecular dynamicsthermophilevirus assembly

Identifiers

PMID36791911
PMCPMC10034513
OpenAlexW4320481222

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read95
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.